RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 HSP90B2PQ58FF3 399 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 LRIG3Q6UXM1 1119 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 UBE2Q1Q7Z7E8 422 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 ZC3H18Q86VM9 953 aaKnown RBP16.1■□□□□ 0.17
LSM6-201ENST00000296581 ARHGAP18Q8N392 663 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 RIN2Q8WYP3 895 aaPredicted RBP16.1■□□□□ 0.17
LSM6-201ENST00000296581 RTP4Q96DX8 246 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 IL23AQ9NPF7 189 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 COMMD8Q9NX08 183 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 HEY1Q9Y5J3 304 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 A0A1W2PQH9 124 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 BCLAF3A2AJT9 711 aaKnown RBP16.09■□□□□ 0.17
LSM6-201ENST00000296581 CFAP69A5D8W1 941 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 CARNS1A5YM72 827 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 SOD2P04179 222 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 ACRP10323 421 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 RARGP13631 454 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 HCAR3P49019 387 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 ZNF135P52742 658 aaPredicted RBP16.09■□□□□ 0.17
LSM6-201ENST00000296581 USP46P62068 366 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 DPYSQ14117 519 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 PSMD5Q16401 504 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 DARS2Q6PI48 645 aaKnown RBP16.09■□□□□ 0.17
LSM6-201ENST00000296581 DENND5BQ6ZUT9 1274 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 UBLCP1Q8WVY7 318 aaPredicted RBP16.09■□□□□ 0.17
LSM6-201ENST00000296581 FOXP3Q9BZS1 431 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 EPB41L4BQ9H329 900 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 WDCPQ9H6R7 721 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 TPX2Q9ULW0 747 aaKnown RBP16.09■□□□□ 0.17
LSM6-201ENST00000296581 PLAAQ9Y263 795 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 SLC27A5Q9Y2P5 690 aa16.09■□□□□ 0.17
LSM6-201ENST00000296581 MRPL42Q9Y6G3 142 aaKnown RBP16.09■□□□□ 0.17
LSM6-201ENST00000296581 WDR27A2RRH5 827 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 H0YGN5 161 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 H7C0C1 242 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 ADAM12O43184 909 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 RTN3O95197 1032 aaPredicted RBP16.08■□□□□ 0.17
LSM6-201ENST00000296581 LAG3P18627 525 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 RPL22P35268 128 aaKnown RBP16.08■□□□□ 0.17
LSM6-201ENST00000296581 ATP5OP48047 213 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 MNAT1P51948 309 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 GBE1Q04446 702 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 SLC10A2Q12908 348 aaPredicted RBP16.08■□□□□ 0.17
LSM6-201ENST00000296581 BTG3Q14201 252 aaPredicted RBP16.08■□□□□ 0.17
LSM6-201ENST00000296581 FAM117BQ6P1L5 589 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 MSANTD2Q6P1R3 559 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 LRRC31Q6UY01 552 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 MICALL1Q8N3F8 863 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 FAM71DQ8N9W8 422 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 STKLD1Q8NE28 680 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 RUFY1Q96T51 708 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 HERC2P3Q9BVR0 1158 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 TKTL2Q9H0I9 626 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 PABPC3Q9H361 631 aaKnown RBP16.08■□□□□ 0.17
LSM6-201ENST00000296581 USP29Q9HBJ7 922 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 ETNK2Q9NVF9 386 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 OSER1Q9NX31 292 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 NFS1Q9Y697 457 aa16.08■□□□□ 0.17
LSM6-201ENST00000296581 KIAA1671Q9BY89 1806 aa16.08■□□□□ 0.16
LSM6-201ENST00000296581 EEF2KO00418 725 aaKnown RBP16.08■□□□□ 0.16
LSM6-201ENST00000296581 OPA1O60313 960 aa16.08■□□□□ 0.16
LSM6-201ENST00000296581 SOAT2O75908 522 aa16.08■□□□□ 0.16
LSM6-201ENST00000296581 CHKAP35790 457 aa16.08■□□□□ 0.16
LSM6-201ENST00000296581 RPL10AP62906 217 aaKnown RBP16.08■□□□□ 0.16
LSM6-201ENST00000296581 MORF4L2Q15014 288 aa16.08■□□□□ 0.16
LSM6-201ENST00000296581 MGAT5BQ3V5L5 792 aa16.08■□□□□ 0.16
LSM6-201ENST00000296581 SPOUT1Q5T280 376 aaKnown RBP16.08■□□□□ 0.16
LSM6-201ENST00000296581 RNASEH2BQ5TBB1 312 aaKnown RBP16.08■□□□□ 0.16
LSM6-201ENST00000296581 RFX8Q6ZV50 586 aa16.08■□□□□ 0.16
LSM6-201ENST00000296581 COLGALT1Q8NBJ5 622 aa16.08■□□□□ 0.16
LSM6-201ENST00000296581 CASP10Q92851 521 aa16.08■□□□□ 0.16
LSM6-201ENST00000296581 CEP295NLQ96MC4 621 aa16.08■□□□□ 0.16
LSM6-201ENST00000296581 ARHGEF38Q9NXL2 777 aa16.08■□□□□ 0.16
LSM6-201ENST00000296581 ALPK3Q96L96 1907 aa16.08■□□□□ 0.16
LSM6-201ENST00000296581 FAM72CH0Y354 149 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 CREB3O43889 395 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 YWHAQP27348 245 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 DSG1Q02413 1049 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 DUSP4Q13115 394 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 PAFAH1B3Q15102 231 aaKnown RBP16.07■□□□□ 0.16
LSM6-201ENST00000296581 BRMS1LQ5PSV4 323 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 FAM72AQ5TYM5 149 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 FAM72DQ6L9T8 149 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 FAM72BQ86X60 149 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 CDKL3Q8IVW4 592 aaPredicted RBP16.07■□□□□ 0.16
LSM6-201ENST00000296581 ZCCHC9Q8N567 271 aaKnown RBP16.07■□□□□ 0.16
LSM6-201ENST00000296581 TMEM169Q96HH4 297 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 OLFM3Q96PB7 478 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 SEPT5Q99719 369 aaPredicted RBP16.07■□□□□ 0.16
LSM6-201ENST00000296581 DTLQ9NZJ0 730 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 GMIPQ9P107 970 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 FARP1Q9Y4F1 1045 aaPredicted RBP16.07■□□□□ 0.16
LSM6-201ENST00000296581 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.07■□□□□ 0.16
LSM6-201ENST00000296581 DCLK1O15075 740 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 OR1D2P34982 312 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 BZW1Q7L1Q6 419 aaKnown RBP16.07■□□□□ 0.16
LSM6-201ENST00000296581 C16orf59Q7L2K0 433 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 PCGF5Q86SE9 256 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 RELL1Q8IUW5 271 aa16.07■□□□□ 0.16
LSM6-201ENST00000296581 QKIQ96PU8 341 aaKnown RBP eCLIP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms