RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 HGSNATQ68CP4 663 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 IDO2Q6ZQW0 420 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 TTYH2Q9BSA4 534 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 CINPQ9BW66 212 aaPredicted RBP12.03□□□□□ -0.48
SNIP1-201ENST00000296215 GTPBP2Q9BX10 602 aaKnown RBP12.03□□□□□ -0.48
SNIP1-201ENST00000296215 INO80BQ9C086 356 aaPredicted RBP12.03□□□□□ -0.48
SNIP1-201ENST00000296215 IMPAD1Q9NX62 359 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 GCNT4Q9P109 453 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 A0A087X0T9 212 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 ADAM23O75077 832 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 FUCA1P04066 466 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 GALCP54803 685 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 CDH15P55291 814 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 PRKCEQ02156 737 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 UBE3CQ15386 1083 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 ABCB5Q2M3G0 1257 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 FIGNQ5HY92 759 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 ANKRD40Q6AI12 368 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 UGT3A1Q6NUS8 523 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 DPY19L3Q6ZPD9 716 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 PRKAG2Q9UGJ0 569 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 A8MV72 311 aaPredicted RBP12.03□□□□□ -0.48
SNIP1-201ENST00000296215 POLR1CO15160 346 aaPredicted RBP12.03□□□□□ -0.48
SNIP1-201ENST00000296215 RBP3P10745 1247 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 CD53P19397 219 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 DEFA5Q01523 94 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 PKN2Q16513 984 aaKnown RBP12.03□□□□□ -0.48
SNIP1-201ENST00000296215 C3orf62Q6ZUJ4 267 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 RNF135Q8IUD6 432 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 RELL1Q8IUW5 271 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 KRT78Q8N1N4 520 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 OXER1Q8TDS5 423 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 NMUR2Q9GZQ4 415 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.03□□□□□ -0.48
SNIP1-201ENST00000296215 SLC7A8Q9UHI5 535 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 ZHX2Q9Y6X8 837 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 ASXL2Q76L83 1435 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 GPC5P78333 572 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 DMC1Q14565 340 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 CACHD1Q5VU97 1274 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 BHLHB9Q6PI77 547 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 TXNDC11Q6PKC3 985 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 KCTD8Q6ZWB6 473 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 RHPN2Q8IUC4 686 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 C3orf58Q8NDZ4 430 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 CHPT1Q8WUD6 406 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 PMM1Q92871 262 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 RAPGEFL1Q9UHV5 662 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 STXBP5LQ9Y2K9 1186 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 KIF14Q15058 1648 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 GPAA1O43292 621 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 PRDM1O75626 825 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 SRP72O76094 671 aaKnown RBP12.02□□□□□ -0.48
SNIP1-201ENST00000296215 POU6F2P78424 691 aaPredicted RBP12.02□□□□□ -0.48
SNIP1-201ENST00000296215 GALEQ14376 348 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 VEPH1Q14D04 833 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 STXBP2Q15833 593 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 PLET1Q6UQ28 207 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 USP49Q70CQ1 688 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 P3H2Q8IVL5 708 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 TBC1D21Q8IYX1 336 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 SLC15A4Q8N697 577 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 ANKK1Q8NFD2 765 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 TMEM168Q9H0V1 697 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 VPS11Q9H270 941 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 XKR8Q9H6D3 395 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 SLC24A2Q9UI40 661 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 PSME2Q9UL46 239 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 RUVBL2Q9Y230 463 aaKnown RBP12.02□□□□□ -0.48
SNIP1-201ENST00000296215 RAD54BQ9Y620 910 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 CDY1Q9Y6F8 540 aa12.02□□□□□ -0.48
SNIP1-201ENST00000296215 ABCC5O15440 1437 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 MTA2O94776 668 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 PLATP00750 562 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 APOC1P02654 83 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 PKNOX1P55347 436 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 GSTO1P78417 241 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 CD83Q01151 205 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 ZYXQ15942 572 aaKnown RBP12.02□□□□□ -0.49
SNIP1-201ENST00000296215 MFSD5Q6N075 450 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 DENND5BQ6ZUT9 1274 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 USP43Q70EL4 1123 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 GLYCTKQ8IVS8 523 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 LURAP1Q96LR2 239 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 MKNK2Q9HBH9 465 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 PCDHB2Q9Y5E7 798 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 EMSYQ7Z589 1322 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 LOC110117498-PIK3R3F6TDL0 507 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 CLDN3O15551 220 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 PDE8AO60658 829 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 DNAJB5O75953 348 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 TFE3P19532 575 aaPredicted RBP12.02□□□□□ -0.49
SNIP1-201ENST00000296215 FBLN1P23142 703 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 PDHA2P29803 388 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 SLC5A2P31639 672 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 PPP3CCP48454 512 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 DBPQ10586 325 aaPredicted RBP12.02□□□□□ -0.49
SNIP1-201ENST00000296215 Q3ZCU0 254 aa12.02□□□□□ -0.49
SNIP1-201ENST00000296215 ALYREFQ86V81 257 aaKnown RBP12.02□□□□□ -0.49
SNIP1-201ENST00000296215 MICALL2Q8IY33 904 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms