RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SAR1AQ9NR31 198 aa13.12□□□□□ -0.31
PTCD1-201ENST00000292478 ASTN1O14525 1302 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 RAMP2O60895 175 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 UBTFL6P0CB48 400 aaPredicted RBP13.11□□□□□ -0.31
PTCD1-201ENST00000292478 ALOX15P16050 662 aaPredicted RBP13.11□□□□□ -0.31
PTCD1-201ENST00000292478 VCLP18206 1134 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 KDELR1P24390 212 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 TKTP29401 623 aaKnown RBP13.11□□□□□ -0.31
PTCD1-201ENST00000292478 ATXN3P54252 364 aaPredicted RBP13.11□□□□□ -0.31
PTCD1-201ENST00000292478 HYIQ5T013 277 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 ETNPPLQ8TBG4 499 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 PAWRQ96IZ0 340 aaKnown RBP13.11□□□□□ -0.31
PTCD1-201ENST00000292478 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
PTCD1-201ENST00000292478 MRPL9Q9BYD2 267 aaKnown RBP13.11□□□□□ -0.31
PTCD1-201ENST00000292478 KLHL4Q9C0H6 718 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 SNTNA6NMZ2 147 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 PTPRAP18433 802 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 GLRBP48167 497 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 DRG2P55039 364 aaKnown RBP13.11□□□□□ -0.31
PTCD1-201ENST00000292478 NCKAP1LP55160 1127 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 DDR1Q08345 913 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 CSHL1Q14406 222 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 PARP6Q2NL67 630 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 B4GALNT2Q8NHY0 566 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 C2CD2LO14523 706 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 OCM2P0CE71 109 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 OCMP0CE72 109 aaPredicted RBP13.11□□□□□ -0.31
PTCD1-201ENST00000292478 TFE3P19532 575 aaPredicted RBP13.11□□□□□ -0.31
PTCD1-201ENST00000292478 ADORA2AP29274 412 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 NUP107P57740 925 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 DPYSL3Q14195 570 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 OOSP2Q86WS3 158 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 KYQ8NBH2 561 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 TCP10LQ8TDR4 215 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 VPS33AQ96AX1 596 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 MAF1Q9H063 256 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 TCF7L2Q9NQB0 619 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 STARD7Q9NQZ5 370 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 DNPEPQ9ULA0 475 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 DYRK1BQ9Y463 629 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 F8W810 466 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 MAP2K7O14733 419 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 ERBB2P04626 1255 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 PPP3CAQ08209 521 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 CELF3Q5SZQ8 465 aaKnown RBP13.11□□□□□ -0.31
PTCD1-201ENST00000292478 WDR59Q6PJI9 974 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 DEFB106AQ8N104 65 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 CXorf56Q9H5V9 222 aa13.11□□□□□ -0.31
PTCD1-201ENST00000292478 KRCC1Q9NPI7 259 aaPredicted RBP13.11□□□□□ -0.31
PTCD1-201ENST00000292478 CKMP06732 381 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 MLNP12872 115 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 PSMC3P17980 439 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 PPIL2Q13356 520 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 DOLKQ9UPQ8 538 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 CASTOR2A6NHX0 329 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 WDR47O94967 919 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 TFRCP02786 760 aaKnown RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 ABHD2P08910 425 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 FAM153BP0C7A2 387 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 CLK1P49759 484 aaKnown RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 ACVR2BQ13705 512 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 BMPR2Q13873 1038 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 FAM153CQ494X1 144 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 USP50Q70EL3 339 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 TLK2Q86UE8 772 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 OTULINQ96BN8 352 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 ABHD8Q96I13 439 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 TBL1YQ9BQ87 522 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 WDR18Q9BV38 432 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 FAM153AQ9UHL3 310 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 CPA4Q9UI42 421 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 SPACA6W5XKT8 324 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 MARSP56192 900 aaKnown RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 CAMK2GQ13555 558 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 ATP6AP1LQ52LC2 224 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 PLPPR4Q7Z2D5 763 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 ZNF467Q7Z7K2 595 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 ZFPM1Q8IX07 1006 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 SRPK1Q96SB4 655 aaKnown RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 APOL2Q9BQE5 337 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 BTBD10Q9BSF8 475 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 ENTPD7Q9NQZ7 604 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 C3P01024 1663 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 A0A087X1B8 175 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 WDR27A2RRH5 827 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 MAP3K13O43283 966 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 MAFO75444 373 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 NOS2P35228 1153 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 NCALDP61601 193 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 EIF2B5Q13144 721 aaKnown RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 MSLNQ13421 630 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 CCDC60Q8IWA6 550 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-201ENST00000292478 HDAC7Q8WUI4 952 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 HSFY1Q96LI6 401 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 UROC1Q96N76 676 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 SHCBP1LQ9BZQ2 653 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 CAAP1Q9H8G2 361 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 MYOM1P52179 1685 aa13.1□□□□□ -0.31
PTCD1-201ENST00000292478 RNF103O00237 685 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms