RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 VARS2Q5ST30 1063 aaKnown RBP10.52□□□□□ -0.72
C9orf43-201ENST00000288462 FAM72AQ5TYM5 149 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 FAM72DQ6L9T8 149 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 TAOK1Q7L7X3 1001 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 ANKRD33Q7Z3H0 272 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 EXOC3L1Q86VI1 746 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 FAM72BQ86X60 149 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 NPAS4Q8IUM7 802 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 PDIK1LQ8N165 341 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 SCAMP5Q8TAC9 235 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 CCDC110Q8TBZ0 833 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 TFB1MQ8WVM0 346 aaKnown RBP10.52□□□□□ -0.72
C9orf43-201ENST00000288462 CENPTQ96BT3 561 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 KLC2Q9H0B6 622 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.52□□□□□ -0.72
C9orf43-201ENST00000288462 FETUBQ9UGM5 382 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 RAD54BQ9Y620 910 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 GREB1Q4ZG55 1949 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 COL4A6Q14031 1691 aa10.52□□□□□ -0.72
C9orf43-201ENST00000288462 EXOC1LA0A1B0GW35 172 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 CREB3O43889 395 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 PQBP1O60828 265 aaKnown RBP10.52□□□□□ -0.73
C9orf43-201ENST00000288462 TADA2AO75478 443 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 ZNF189O75820 626 aaPredicted RBP10.52□□□□□ -0.73
C9orf43-201ENST00000288462 CCL5P13501 91 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 TPSB2P20231 275 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 FGFR3P22607 806 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 MAGEA11P43364 429 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 YWHAGP61981 247 aaKnown RBP eCLIP10.52□□□□□ -0.73
C9orf43-201ENST00000288462 TPSAB1Q15661 275 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 SKIDA1Q1XH10 827 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 ARL13BQ3SXY8 428 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 HEATR6Q6AI08 1181 aaKnown RBP10.52□□□□□ -0.73
C9orf43-201ENST00000288462 VSTM1Q6UX27 236 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 ANKMY2Q8IV38 441 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 HTR3CQ8WXA8 447 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 C8orf48Q96LL4 319 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 EPN3Q9H201 632 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 SMOC2Q9H3U7 446 aa10.52□□□□□ -0.73
C9orf43-201ENST00000288462 A0A0A0MRY4 1105 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.51□□□□□ -0.73
C9orf43-201ENST00000288462 OR6C75A6NL08 312 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 IRAK2O43187 625 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 GRIK1P39086 918 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 SLC11A1P49279 550 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 GLUD2P49448 558 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 MNX1P50219 401 aaPredicted RBP10.51□□□□□ -0.73
C9orf43-201ENST00000288462 TPI1P60174 286 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 SEMA5AQ13591 1074 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 PDK1Q15118 436 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 BBS9Q3SYG4 887 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 CCDC38Q502W7 563 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 HP1BP3Q5SSJ5 553 aaPredicted RBP10.51□□□□□ -0.73
C9orf43-201ENST00000288462 ZNF280DQ6N043 979 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 SCD5Q86SK9 330 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 MCUQ8NE86 351 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 FBXO36Q8NEA4 188 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 PYROXD1Q8WU10 500 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 LRRN4Q8WUT4 740 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 ARHGEF2Q92974 986 aaKnown RBP10.51□□□□□ -0.73
C9orf43-201ENST00000288462 SPATA13Q96N96 652 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 TMEM175Q9BSA9 504 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 MRPL9Q9BYD2 267 aaKnown RBP10.51□□□□□ -0.73
C9orf43-201ENST00000288462 TKTL2Q9H0I9 626 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 VPS37BQ9H9H4 285 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 ABCC13Q9NSE7 274 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 ARHGEF38Q9NXL2 777 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 ABI2Q9NYB9 513 aaPredicted RBP10.51□□□□□ -0.73
C9orf43-201ENST00000288462 LRFN2Q9ULH4 789 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 TEX264Q9Y6I9 313 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 PPP1R12AO14974 1030 aaPredicted RBP10.51□□□□□ -0.73
C9orf43-201ENST00000288462 TRIM66O15016 1216 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 PARNO95453 639 aaKnown RBP10.51□□□□□ -0.73
C9orf43-201ENST00000288462 METTL18O95568 372 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 ERCC2P18074 760 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 CYP2C18P33260 490 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 PHBP35232 272 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 MAGEA3P43357 314 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 CTXN3Q4LDR2 81 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 FAXCQ5TGI0 409 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 FAM171A1Q5VUB5 890 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 CYP4X1Q8N118 509 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 VPS52Q8N1B4 723 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 ATXN2LQ8WWM7 1075 aaKnown RBP10.51□□□□□ -0.73
C9orf43-201ENST00000288462 MAML1Q92585 1016 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 LGMNQ99538 433 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 EPAS1Q99814 870 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 SELENOSQ9BQE4 189 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 GPR62Q9BZJ7 368 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 ACSS3Q9H6R3 686 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 WDCPQ9H6R7 721 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 ETNK1Q9HBU6 452 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 SLC24A2Q9UI40 661 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 RABGEF1Q9UJ41 708 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 NEU3Q9UQ49 428 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 SCML2Q9UQR0 700 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 PCDHB5Q9Y5E4 795 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 ACTL7BQ9Y614 415 aa10.51□□□□□ -0.73
C9orf43-201ENST00000288462 OPHN1O60890 802 aa10.5□□□□□ -0.73
C9orf43-201ENST00000288462 CHN1P15882 459 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms