RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MYADMQ96S97 322 aa22.64■■□□□ 1.21
PDLIM3-203ENST00000284771 NCAPGQ9BPX3 1015 aa22.64■■□□□ 1.21
PDLIM3-203ENST00000284771 FZD10Q9ULW2 581 aa22.64■■□□□ 1.21
PDLIM3-203ENST00000284771 ARHGAP26Q9UNA1 814 aa22.64■■□□□ 1.21
PDLIM3-203ENST00000284771 HELZP42694 1942 aaKnown RBP22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 CTNNA2P26232 953 aa22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 MTHFRP42898 656 aa22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 DNA2P51530 1060 aa22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 KPNA1P52294 538 aaPredicted RBP22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 BRMS1LQ5PSV4 323 aa22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 POLNQ7Z5Q5 900 aa22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 PYROXD2Q8N2H3 581 aa22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 ST13P5Q8NFI4 369 aaPredicted RBP22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 NTAN1Q96AB6 310 aa22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 TDP1Q9NUW8 608 aa22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 KLHL11Q9NVR0 708 aa22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 DNAI1Q9UI46 699 aa22.63■■□□□ 1.21
PDLIM3-203ENST00000284771 SCAMP3O14828 347 aaKnown RBP22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 IRF1P10914 325 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 HADHQ16836 314 aaKnown RBP22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 BOLA3Q53S33 107 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 FAM78AQ5JUQ0 283 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 ARTNQ5T4W7 220 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 DCAF12L1Q5VU92 463 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 HLA-CQ95604 372 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 LRRC3BQ96PB8 259 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 ZMYM5Q9UJ78 669 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 CDH7Q9ULB5 785 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 CCDC66A2RUB6 948 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 LEFTY2O00292 366 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 PSTPIP1O43586 416 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 PAGE1O75459 146 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 MOCS2O96007 188 aaPredicted RBP22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 SCAPQ12770 1279 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 ANKS1BQ7Z6G8 1248 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 RAPGEF5Q92565 580 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 HSPH1Q92598 858 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 PLD4Q96BZ4 506 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 RSPRY1Q96DX4 576 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 ASB16Q96NS5 453 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 GDE1Q9NZC3 331 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 SNX10Q9Y5X0 201 aa22.62■■□□□ 1.21
PDLIM3-203ENST00000284771 NUP210Q8TEM1 1887 aaPredicted RBP22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 MIF4GDA9UHW6 222 aaKnown RBP22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 FAM72CH0Y354 149 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 MBTPS2O43462 519 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 CD48P09326 243 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 SLC2A3P11169 496 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 WEE1P30291 646 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 GGCXP38435 758 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 ARSEP51690 589 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 RPS6KA1Q15418 735 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 FAM72AQ5TYM5 149 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 FAM72DQ6L9T8 149 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 FAM72BQ86X60 149 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 DENND1CQ8IV53 801 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 SH3RF2Q8TEC5 729 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 TEKT4Q8WW24 435 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 PSMB7Q99436 277 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 AP4E1Q9UPM8 1137 aa22.61■■□□□ 1.21
PDLIM3-203ENST00000284771 KRT7P08729 469 aa22.6■■□□□ 1.21
PDLIM3-203ENST00000284771 CORO1AP31146 461 aaKnown RBP22.6■■□□□ 1.21
PDLIM3-203ENST00000284771 VIPR2P41587 438 aa22.6■■□□□ 1.21
PDLIM3-203ENST00000284771 PIK3R6Q5UE93 754 aa22.6■■□□□ 1.21
PDLIM3-203ENST00000284771 NUGGCQ68CJ6 796 aa22.6■■□□□ 1.21
PDLIM3-203ENST00000284771 NADSYN1Q6IA69 706 aa22.6■■□□□ 1.21
PDLIM3-203ENST00000284771 UNC45BQ8IWX7 931 aa22.6■■□□□ 1.21
PDLIM3-203ENST00000284771 TTC16Q8NEE8 873 aa22.6■■□□□ 1.21
PDLIM3-203ENST00000284771 NECTIN4Q96NY8 510 aa22.6■■□□□ 1.21
PDLIM3-203ENST00000284771 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.6■■□□□ 1.21
PDLIM3-203ENST00000284771 CFAP97Q9P2B7 532 aa22.6■■□□□ 1.21
PDLIM3-203ENST00000284771 AGO1Q9UL18 857 aaKnown RBP22.6■■□□□ 1.21
PDLIM3-203ENST00000284771 C3orf70A6NLC5 250 aaPredicted RBP22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 PI4K2BG5E9Z4 385 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 APOEP02649 317 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 IL4RP24394 825 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 L1CAMP32004 1257 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 CXCR5P32302 372 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 AIF1P55008 147 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 ARL13BQ3SXY8 428 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 MS4A13Q5J8X5 152 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 AADACL2Q6P093 401 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 Q6ZNB5 142 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 KATNAL2Q8IYT4 538 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 SMARCD2Q92925 531 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 BTN2A3PQ96KV6 586 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 HAPLN3Q96S86 360 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 SIK2Q9H0K1 926 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 DHX35Q9H5Z1 703 aaKnown RBP22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 PRDM6Q9NQX0 595 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 TMEM51Q9NW97 253 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 HS3ST4Q9Y661 456 aa22.59■■□□□ 1.21
PDLIM3-203ENST00000284771 GOLGA6L7A0A1B0GV03 622 aa22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 PYGMP11217 842 aa22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 LAMP2P13473 410 aa22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 FCARP24071 287 aa22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 HARS2P49590 506 aaKnown RBP22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 MLLT6P55198 1093 aaPredicted RBP22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 SEMA3BQ13214 749 aa22.58■■□□□ 1.21
PDLIM3-203ENST00000284771 SMAD4Q13485 552 aaKnown RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms