RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 CCDC40Q4G0X9 1142 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 MPPE1Q53F39 396 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 COBLL1Q53SF7 1204 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 PM20D1Q6GTS8 502 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 TMEM270Q6UE05 265 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 BHLHA9Q7RTU4 235 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 ZC3H3Q8IXZ2 948 aaKnown RBP13.33□□□□□ -0.28
CD44-203ENST00000278386 ZCCHC9Q8N567 271 aaKnown RBP13.33□□□□□ -0.28
CD44-203ENST00000278386 SORCS1Q8WY21 1168 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 PRCCQ92733 491 aaPredicted RBP13.33□□□□□ -0.28
CD44-203ENST00000278386 PIWIL1Q96J94 861 aaKnown RBP13.33□□□□□ -0.28
CD44-203ENST00000278386 NT5C1BQ96P26 610 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 GPR174Q9BXC1 333 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 MKRN2Q9H000 416 aaKnown RBP13.33□□□□□ -0.28
CD44-203ENST00000278386 MIR1-1HGQ9H1L0 117 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 USP36Q9P275 1121 aaKnown RBP13.33□□□□□ -0.28
CD44-203ENST00000278386 CLEC4EQ9ULY5 219 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 COQ4Q9Y3A0 265 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 HBS1LQ9Y450 684 aaKnown RBP13.33□□□□□ -0.28
CD44-203ENST00000278386 CEP295Q9C0D2 2601 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 NUMA1Q14980 2115 aa13.33□□□□□ -0.28
CD44-203ENST00000278386 YJEFN3A6XGL0 299 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 E7ENQ6 273 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 M0QYV0 167 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 O00370 1275 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 PIK3R2O00459 728 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 PSMA7O14818 248 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 HYAL3O43820 417 aaPredicted RBP13.32□□□□□ -0.28
CD44-203ENST00000278386 HLA-EP13747 358 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 MAOBP27338 520 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 HOXD9P28356 352 aaPredicted RBP13.32□□□□□ -0.28
CD44-203ENST00000278386 FMO5P49326 533 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 RGS7P49802 495 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 ZNF132P52740 706 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 TRIP4Q15650 581 aaPredicted RBP13.32□□□□□ -0.28
CD44-203ENST00000278386 FNDC3BQ53EP0 1204 aaKnown RBP13.32□□□□□ -0.28
CD44-203ENST00000278386 BSPRYQ5W0U4 402 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 PIP4P1Q86T03 277 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 TMPRSS6Q8IU80 811 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 FAM217AQ8IXS0 508 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 PPM1KQ8N3J5 372 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 SNX19Q92543 992 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 SLC35C1Q96A29 364 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 ZNF419Q96HQ0 510 aaPredicted RBP13.32□□□□□ -0.28
CD44-203ENST00000278386 SLC2A11Q9BYW1 496 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 GTPBP4Q9BZE4 634 aaKnown RBP13.32□□□□□ -0.28
CD44-203ENST00000278386 ABCC13Q9NSE7 274 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 WSB2Q9NYS7 404 aaPredicted RBP13.32□□□□□ -0.28
CD44-203ENST00000278386 PCDHB4Q9Y5E5 795 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 ASPMQ8IZT6 3477 aa13.32□□□□□ -0.28
CD44-203ENST00000278386 UPK3BL1B0FP48 263 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 KCNJ18B7U540 433 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 UPK3BL2E5RIL1 263 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 OXTRP30559 389 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 TPMTP51580 245 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 COPAP53621 1224 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 DAOAP59103 153 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 ZNF445P59923 1031 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 GRIK2Q13002 908 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 ENPP2Q13822 863 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 DCAF12L1Q5VU92 463 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 ISM2Q6H9L7 571 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 KLHL10Q6JEL2 608 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 CHST9Q7L1S5 443 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 METTL3Q86U44 580 aaKnown RBP13.31□□□□□ -0.28
CD44-203ENST00000278386 FAM124AQ86V42 546 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 UBR7Q8N806 425 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 ZNF366Q8N895 744 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 WFIKKN2Q8TEU8 576 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 CYB5D2Q8WUJ1 264 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 GOLGA1Q92805 767 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 METTL14Q9HCE5 456 aaKnown RBP13.31□□□□□ -0.28
CD44-203ENST00000278386 CNGB3Q9NQW8 809 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 ABCB8Q9NUT2 735 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 DNAAF2Q9NVR5 837 aaKnown RBP13.31□□□□□ -0.28
CD44-203ENST00000278386 ZMIZ1Q9ULJ6 1067 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 WASF3Q9UPY6 502 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 WDFY3Q8IZQ1 3526 aa13.31□□□□□ -0.28
CD44-203ENST00000278386 CFAP47Q6ZTR5 3102 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 PLXNA2O75051 1894 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 A0A1B0GTW7 788 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 LATS1O95835 1130 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 PAEPP09466 180 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 BRD2P25440 801 aaKnown RBP13.3□□□□□ -0.28
CD44-203ENST00000278386 HLA-FP30511 346 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 RDXP35241 583 aaKnown RBP13.3□□□□□ -0.28
CD44-203ENST00000278386 CETN1Q12798 172 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 BECN1Q14457 450 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 TMEM215Q68D42 235 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 LCLAT1Q6UWP7 414 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 NAXDQ8IW45 347 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 AHI1Q8N157 1196 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 OR2T3Q8NH03 318 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 KCTD13Q8WZ19 329 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 TMA16Q96EY4 203 aaKnown RBP13.3□□□□□ -0.28
CD44-203ENST00000278386 CEP63Q96MT8 703 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 LHX5Q9H2C1 402 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 ITM2CQ9NQX7 267 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 GGA2Q9UJY4 613 aa13.3□□□□□ -0.28
CD44-203ENST00000278386 KIAA1257Q9ULG3 409 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms