RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 DGCR14Q96DF8 476 aaKnown RBP19.24■□□□□ 0.67
SSC4D-201ENST00000275560 MIS12Q9H081 205 aa19.24■□□□□ 0.67
SSC4D-201ENST00000275560 RPAP3Q9H6T3 665 aaPredicted RBP19.24■□□□□ 0.67
SSC4D-201ENST00000275560 NGRNQ9NPE2 291 aaKnown RBP19.24■□□□□ 0.67
SSC4D-201ENST00000275560 DNAAF2Q9NVR5 837 aaKnown RBP19.24■□□□□ 0.67
SSC4D-201ENST00000275560 TMEM216Q9P0N5 145 aa19.24■□□□□ 0.67
SSC4D-201ENST00000275560 GOLGA8QA0A0J9YX86 632 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 GOLGA8OA6NCC3 632 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 GOLGA8NF8WBI6 632 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 ZNF195O14628 629 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 AIM2O14862 343 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 PLIN3O60664 434 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 SUPT20HL2P0C7V6 817 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 PIM1P11309 404 aaPredicted RBP19.23■□□□□ 0.67
SSC4D-201ENST00000275560 SERPINB5P36952 375 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 MYLK3Q32MK0 819 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 SUPT20HL1Q3ZLR7 823 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 SLC9B1Q4ZJI4 515 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 ZFP28Q8NHY6 868 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 CLMNQ96JQ2 1002 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 DHX33Q9H6R0 707 aaKnown RBP19.23■□□□□ 0.67
SSC4D-201ENST00000275560 MGAMO43451 1857 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 SMIM31A0A1B0GVY4 71 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 DGKIO75912 1065 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 RGS7P49802 495 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 C6orf52Q5T4I8 152 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 WDR78Q5VTH9 848 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 SDCCAG8Q86SQ7 713 aaPredicted RBP19.23■□□□□ 0.67
SSC4D-201ENST00000275560 RTKN2Q8IZC4 609 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 GALNT4Q8N4A0 578 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 MAPK15Q8TD08 544 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 PRPF18Q99633 342 aaKnown RBP19.23■□□□□ 0.67
SSC4D-201ENST00000275560 ASNSD1Q9NWL6 643 aa19.23■□□□□ 0.67
SSC4D-201ENST00000275560 HEMK1Q9Y5R4 338 aaPredicted RBP19.23■□□□□ 0.67
SSC4D-201ENST00000275560 PRPSAP2O60256 369 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 ENDOD1O94919 500 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 OATP04181 439 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 COX4I1P13073 169 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 ABCG1P45844 678 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 GBE1Q04446 702 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 OR6B2Q6IFH4 312 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 NCAPG2Q86XI2 1143 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 CEP41Q9BYV8 373 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 ELOVL4Q9GZR5 314 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 XPNPEP3Q9NQH7 507 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 TMCO1Q9UM00 188 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 COL2A1P02458 1487 aaPredicted RBP19.22■□□□□ 0.67
SSC4D-201ENST00000275560 BPTFQ12830 3046 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 CRTAMO95727 393 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 HOXC6P09630 235 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 CDK18Q07002 472 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 CNGA3Q16281 694 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 OGFRL1Q5TC84 451 aaPredicted RBP19.22■□□□□ 0.67
SSC4D-201ENST00000275560 MAP3K21Q5TCX8 1036 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 CMC1Q7Z7K0 106 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 HACE1Q8IYU2 909 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 SLC4A11Q8NBS3 891 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 RAB3IL1Q8TBN0 382 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 PRPF31Q8WWY3 499 aaKnown RBP19.22■□□□□ 0.67
SSC4D-201ENST00000275560 ZNF302Q9NR11 478 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 MFHAS1Q9Y4C4 1052 aa19.22■□□□□ 0.67
SSC4D-201ENST00000275560 APOL1O14791 398 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 PKNOX1P55347 436 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 SESN2P58004 480 aaPredicted RBP19.21■□□□□ 0.67
SSC4D-201ENST00000275560 MYBPC1Q00872 1141 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 TFDP2Q14188 446 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 PQLC1Q8N2U9 271 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 ZNF781Q8N8C0 355 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 PPP4R1Q8TF05 950 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 JADE3Q92613 823 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 CMTM5Q96DZ9 223 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 LENG8Q96PV6 779 aaPredicted RBP19.21■□□□□ 0.67
SSC4D-201ENST00000275560 COPS7BQ9H9Q2 264 aaPredicted RBP19.21■□□□□ 0.67
SSC4D-201ENST00000275560 SORCS3Q9UPU3 1222 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 AFG3L2Q9Y4W6 797 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 PCDHA11Q9Y5I1 949 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 TRIP11Q15643 1979 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 DKC1O60832 514 aaKnown RBP eCLIP19.21■□□□□ 0.67
SSC4D-201ENST00000275560 PFDN1O60925 122 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 TRPA1O75762 1119 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 PENKP01210 267 aaPredicted RBP19.21■□□□□ 0.67
SSC4D-201ENST00000275560 AMHP03971 560 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 GJB1P08034 283 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 TFE3P19532 575 aaPredicted RBP19.21■□□□□ 0.67
SSC4D-201ENST00000275560 GPD1P21695 349 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 GTF2A2P52657 109 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 ZNF143P52747 638 aaPredicted RBP19.21■□□□□ 0.67
SSC4D-201ENST00000275560 MTTPP55157 894 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 SLC10A2Q12908 348 aaPredicted RBP19.21■□□□□ 0.67
SSC4D-201ENST00000275560 SNRNP48Q6IEG0 339 aaKnown RBP19.21■□□□□ 0.67
SSC4D-201ENST00000275560 FAM183BPQ6ZVS7 135 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 TRIM74Q86UV6 250 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 TRIM73Q86UV7 250 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 USP13Q92995 863 aaPredicted RBP19.21■□□□□ 0.67
SSC4D-201ENST00000275560 MCRS1Q96EZ8 462 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 OR52B2Q96RD2 323 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 LHX5Q9H2C1 402 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 COG4Q9H9E3 785 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 AP4B1Q9Y6B7 739 aa19.21■□□□□ 0.67
SSC4D-201ENST00000275560 PDLIM1O00151 329 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms