RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ST13P4Q8IZP2 240 aaPredicted RBP28.34■■■□□ 2.13
CBX4-201ENST00000269397 MCUQ8NE86 351 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 CENPKQ9BS16 269 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 MAN1C1Q9NR34 630 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 ZNF358Q9NW07 568 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 MFHAS1Q9Y4C4 1052 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 TRIP11Q15643 1979 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 ADCY6O43306 1168 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 IQCF3P0C7M6 154 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 PROZP22891 400 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 CYP2F1P24903 491 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 L1CAMP32004 1257 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 MAGEA6P43360 314 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 SERPINB9P50453 376 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 LAMB3Q13751 1172 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 TSHZ1Q6ZSZ6 1077 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 APBB2Q92870 758 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 CLMNQ96JQ2 1002 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 KLHL4Q9C0H6 718 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 DMAP1Q9NPF5 467 aaPredicted RBP28.34■■■□□ 2.13
CBX4-201ENST00000269397 GPR25O00155 361 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 RAG1P15918 1043 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 SESN2P58004 480 aaPredicted RBP28.33■■■□□ 2.13
CBX4-201ENST00000269397 HNRNPDQ14103 355 aaKnown RBP28.33■■■□□ 2.13
CBX4-201ENST00000269397 FAM160B1Q5W0V3 765 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 SORT1Q99523 831 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 B3GNT5Q9BYG0 378 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 NRDE2Q9H7Z3 1164 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 MOCS1Q9NZB8 636 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 A6NJR5 290 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 CCNT2O60583 730 aaKnown RBP28.33■■■□□ 2.13
CBX4-201ENST00000269397 PLIN3O60664 434 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 KLHL2O95198 593 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 BOLA3Q53S33 107 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 PDPK2PQ6A1A2 396 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 FRMD7Q6ZUT3 714 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 EPAS1Q99814 870 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 OXCT2Q9BYC2 517 aaPredicted RBP28.33■■■□□ 2.13
CBX4-201ENST00000269397 CEP41Q9BYV8 373 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 RNPEPQ9H4A4 650 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 XPNPEP3Q9NQH7 507 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 PICK1Q9NRD5 415 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 POMPQ9Y244 141 aa28.33■■■□□ 2.13
CBX4-201ENST00000269397 PHIPQ8WWQ0 1821 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 ANK1P16157 1881 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 VDRP11473 427 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 CD1EP15812 388 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 VCLP18206 1134 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 TNFAIP1Q13829 316 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 PMF1Q6P1K2 205 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 KCNT2Q6UVM3 1135 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 EGFL6Q8IUX8 553 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 AGR3Q8TD06 166 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 MIS12Q9H081 205 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 OCEL1Q9H607 264 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 LCTP09848 1927 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 DCXO43602 365 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 PFKMP08237 780 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 UQCRBP14927 111 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 MMEL1Q495T6 779 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 CES3Q6UWW8 571 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 DHX35Q9H5Z1 703 aaKnown RBP28.32■■■□□ 2.12
CBX4-201ENST00000269397 SORCS3Q9UPU3 1222 aa28.32■■■□□ 2.12
CBX4-201ENST00000269397 ACKR2O00590 384 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 OR6B1O95007 311 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 SPATA31D3P0C874 917 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 CLCN3P51790 818 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 MXD4Q14582 209 aaPredicted RBP28.31■■■□□ 2.12
CBX4-201ENST00000269397 GRAMD1BQ3KR37 738 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 SPATA31D4Q6ZUB0 917 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 SATL1Q86VE3 508 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 TFB1MQ8WVM0 346 aaKnown RBP28.31■■■□□ 2.12
CBX4-201ENST00000269397 TMEM216Q9P0N5 145 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 ZBTB42B2RXF5 422 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 ITGAXP20702 1163 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 SDC4P31431 198 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 USP4Q13107 963 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 PGM2L1Q6PCE3 622 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 PACS1Q6VY07 963 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 ADGRG6Q86SQ4 1221 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 PPP4R1Q8TF05 950 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 ATXN7L3BQ96GX2 97 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 HPDLQ96IR7 371 aa28.31■■■□□ 2.12
CBX4-201ENST00000269397 SPDYE16A6NNV3 312 aaPredicted RBP28.3■■■□□ 2.12
CBX4-201ENST00000269397 ITGA9Q13797 1035 aa28.3■■■□□ 2.12
CBX4-201ENST00000269397 TIFABQ6ZNK6 161 aa28.3■■■□□ 2.12
CBX4-201ENST00000269397 SESTD1Q86VW0 696 aa28.3■■■□□ 2.12
CBX4-201ENST00000269397 ARHGAP18Q8N392 663 aa28.3■■■□□ 2.12
CBX4-201ENST00000269397 SEPT1Q8WYJ6 367 aa28.3■■■□□ 2.12
CBX4-201ENST00000269397 UBE2OQ9C0C9 1292 aaKnown RBP28.3■■■□□ 2.12
CBX4-201ENST00000269397 IFT122Q9HBG6 1241 aa28.3■■■□□ 2.12
CBX4-201ENST00000269397 PRKCGP05129 697 aa28.3■■■□□ 2.12
CBX4-201ENST00000269397 HDAC4P56524 1084 aa28.3■■■□□ 2.12
CBX4-201ENST00000269397 CBLBQ13191 982 aa28.3■■■□□ 2.12
CBX4-201ENST00000269397 GOLGA7BQ2TAP0 167 aa28.3■■■□□ 2.12
CBX4-201ENST00000269397 HSDL1Q3SXM5 330 aa28.3■■■□□ 2.12
CBX4-201ENST00000269397 FBXL19Q6PCT2 694 aa28.3■■■□□ 2.12
CBX4-201ENST00000269397 CDKL3Q8IVW4 592 aaPredicted RBP28.3■■■□□ 2.12
CBX4-201ENST00000269397 GBA2Q9HCG7 927 aaPredicted RBP28.3■■■□□ 2.12
CBX4-201ENST00000269397 FAM49BQ9NUQ9 324 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms