RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 PSME4Q14997 1843 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 H3BNH8 94 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 STX16-NPEPL1H3BU86 382 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 PFDN6O15212 129 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 KDM1AO60341 852 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 RNASEH2AO75792 299 aaKnown RBP9.04□□□□□ -0.96
VAPB-201ENST00000265619 IFNB1P01574 187 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 ERBB2P04626 1255 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 GNAO1P09471 354 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 HMOX2P30519 316 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 STAT2P52630 851 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 COPAP53621 1224 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 GDF10P55107 478 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 PKNOX1P55347 436 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 PTK7Q13308 1070 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 PPP2R5DQ14738 602 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 TCEAL1Q15170 157 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 SPDYE2Q495Y8 402 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 PERM1Q5SV97 790 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 GPATCH4Q5T3I0 446 aaKnown RBP9.04□□□□□ -0.96
VAPB-201ENST00000265619 PLEKHA7Q6IQ23 1121 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 ANKRD26P1Q6NSI1 321 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 TATDN1Q6P1N9 297 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 BPHLQ86WA6 291 aaPredicted RBP9.04□□□□□ -0.96
VAPB-201ENST00000265619 RHPN2Q8IUC4 686 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 SLC38A6Q8IZM9 456 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 KBTBD7Q8WVZ9 684 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 ANKRD36BP1Q96IX9 119 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 KREMEN1Q96MU8 473 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 SLC29A1Q99808 456 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 KLHL25Q9H0H3 589 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 WWP1Q9H0M0 922 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 PCDH12Q9NPG4 1184 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 DDX56Q9NY93 547 aaKnown RBP9.04□□□□□ -0.96
VAPB-201ENST00000265619 KLHL3Q9UH77 587 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 PRELID1Q9Y255 219 aa9.04□□□□□ -0.96
VAPB-201ENST00000265619 DDX60LQ5H9U9 1706 aaKnown RBP9.03□□□□□ -0.96
VAPB-201ENST00000265619 LOC105371267A0A1B0GV96 52 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 NAT2P11245 290 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 ZNF26P17031 533 aaPredicted RBP9.03□□□□□ -0.96
VAPB-201ENST00000265619 PSMC3P17980 439 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 MAPK4P31152 587 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 ADAM17P78536 824 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 PPP3CAQ08209 521 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 BMPR2Q13873 1038 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 FIBCD1Q8N539 461 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 CYP2W1Q8TAV3 490 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 ZSCAN18Q8TBC5 510 aaPredicted RBP9.03□□□□□ -0.96
VAPB-201ENST00000265619 USP13Q92995 863 aaPredicted RBP9.03□□□□□ -0.96
VAPB-201ENST00000265619 SH2D3AQ9BRG2 576 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 SNX25Q9H3E2 840 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 THEGQ9P2T0 379 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 PRR12Q9ULL5 1215 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 KCNH1O95259 989 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 H6PDO95479 791 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 CHRNB1P11230 501 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 THOP1P52888 689 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 SLC10A2Q12908 348 aaPredicted RBP9.03□□□□□ -0.96
VAPB-201ENST00000265619 PMS2P3Q13401 168 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 PGS1Q32NB8 556 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 PPM1LQ5SGD2 360 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 MOB2Q70IA6 237 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 SIAH1Q8IUQ4 282 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 ZC3H7AQ8IWR0 971 aaKnown RBP9.03□□□□□ -0.96
VAPB-201ENST00000265619 PEX5LQ8IYB4 626 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 SLC43A3Q8NBI5 491 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 NLRP7Q8WX94 980 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 E2F7Q96AV8 911 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 NACC2Q96BF6 587 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 FAR2Q96K12 515 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 LRGUKQ96M69 825 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 ANO3Q9BYT9 981 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 RAVER2Q9HCJ3 691 aaKnown RBP9.03□□□□□ -0.96
VAPB-201ENST00000265619 ERGIC3Q9Y282 383 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 MCF2LO15068 1137 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 SLC16A3O15427 465 aaKnown RBP9.03□□□□□ -0.96
VAPB-201ENST00000265619 LIASO43766 372 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 ZBTB14O43829 449 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 BMPR1AP36894 532 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 DPP6P42658 865 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 SLC1A1P43005 524 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 GCLMP48507 274 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 CCT8P50990 548 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 HMGCS2P54868 508 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 IFITM3Q01628 133 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 DNASE1L3Q13609 305 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 HYIQ5T013 277 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 EEPD1Q7L9B9 569 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 CHST15Q7LFX5 561 aaPredicted RBP9.03□□□□□ -0.96
VAPB-201ENST00000265619 CPSF7Q8N684 471 aaKnown RBP9.03□□□□□ -0.96
VAPB-201ENST00000265619 JADE3Q92613 823 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 NT5C1BQ96P26 610 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 Q9H521 79 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 COQ10BQ9H8M1 238 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 USTQ9Y2C2 406 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 SNX9Q9Y5X1 595 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 ZHX2Q9Y6X8 837 aa9.03□□□□□ -0.96
VAPB-201ENST00000265619 CXorf49A8MYA2 514 aaPredicted RBP9.02□□□□□ -0.96
VAPB-201ENST00000265619 TMEM114B3SHH9 223 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 GRIN3BO60391 1043 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms