RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 AASDHQ4L235 1098 aaPredicted RBP14.36□□□□□ -0.11
CDH3-201ENST00000264012 TCP10LQ8TDR4 215 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 WNT8BQ93098 351 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 PDGFDQ9GZP0 370 aaPredicted RBP14.36□□□□□ -0.11
CDH3-201ENST00000264012 TKTL2Q9H0I9 626 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 SYTL2Q9HCH5 934 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 IFT172Q9UG01 1749 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 FARP2O94887 1054 aaPredicted RBP14.36□□□□□ -0.11
CDH3-201ENST00000264012 THRAP10827 490 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 ZNF143P52747 638 aaPredicted RBP14.36□□□□□ -0.11
CDH3-201ENST00000264012 INHBEP58166 350 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 ATP13A4Q4VNC1 1196 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 CYB5D1Q6P9G0 228 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 CLEC4FQ8N1N0 589 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 MFSD14AQ96MC6 490 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 TMEM120AQ9BXJ8 343 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 C2CD2Q9Y426 696 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 FKBP9O95302 570 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 NQO1P15559 274 aaKnown RBP14.36□□□□□ -0.11
CDH3-201ENST00000264012 PGAM1P18669 254 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 NOMO3P69849 1222 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 KLC1Q07866 573 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 ABHD15Q6UXT9 468 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 FKBP9P1Q75LS8 142 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 SH3BP5LQ7L8J4 393 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 PHF13Q86YI8 300 aaPredicted RBP14.36□□□□□ -0.11
CDH3-201ENST00000264012 GALNT4Q8N4A0 578 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 TEX9Q8N6V9 391 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 ZNF333Q96JL9 665 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 FAM84AQ96KN4 292 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 HSFY1Q96LI6 401 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 NOD2Q9HC29 1040 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 HMX1Q9NP08 348 aaPredicted RBP14.36□□□□□ -0.11
CDH3-201ENST00000264012 SMPD4Q9NXE4 827 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.36□□□□□ -0.11
CDH3-201ENST00000264012 ZSCAN9O15535 394 aaPredicted RBP14.36□□□□□ -0.11
CDH3-201ENST00000264012 HSPA1AP0DMV8 641 aaKnown RBP14.36□□□□□ -0.11
CDH3-201ENST00000264012 HSPA1BP0DMV9 641 aaKnown RBP14.36□□□□□ -0.11
CDH3-201ENST00000264012 CD151P48509 253 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 LRRC74AQ0VAA2 488 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 MAP2K5Q13163 448 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 PKN2Q16513 984 aaKnown RBP14.36□□□□□ -0.11
CDH3-201ENST00000264012 VPS37AQ8NEZ2 397 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 SLC25A13Q9UJS0 675 aa14.36□□□□□ -0.11
CDH3-201ENST00000264012 FAM32AQ9Y421 112 aaKnown RBP14.36□□□□□ -0.11
CDH3-201ENST00000264012 PGK1P00558 417 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 CCDC15Q0P6D6 951 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 N4BP2L1Q5TBK1 243 aaPredicted RBP14.35□□□□□ -0.11
CDH3-201ENST00000264012 SDE2Q6IQ49 451 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 KCNMB4Q86W47 210 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 C17orf80Q9BSJ5 609 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 MRPL9Q9BYD2 267 aaKnown RBP14.35□□□□□ -0.11
CDH3-201ENST00000264012 CCDC134Q9H6E4 229 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 NPR3P17342 541 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 PCBP1Q15365 356 aaKnown RBP eCLIP14.35□□□□□ -0.11
CDH3-201ENST00000264012 RETSATQ6NUM9 610 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 FAM183BPQ6ZVS7 135 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 ITIH5Q86UX2 942 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 TEKT4Q8WW24 435 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 NUDT5Q9UKK9 219 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 REXO2Q9Y3B8 237 aaKnown RBP14.35□□□□□ -0.11
CDH3-201ENST00000264012 PCDHB12Q9Y5F1 795 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 UBOX5O94941 541 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 NPY2RP49146 381 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 TMED1Q13445 227 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 RASA2Q15283 850 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 CES3Q6UWW8 571 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 MYO1HQ8N1T3 1032 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 PRELID2Q8N945 189 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 OTUB1Q96FW1 271 aaPredicted RBP14.35□□□□□ -0.11
CDH3-201ENST00000264012 ADNPQ9H2P0 1102 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 EFCAB1Q9HAE3 211 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 ATP13A1Q9HD20 1204 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 PCYOX1Q9UHG3 505 aa14.35□□□□□ -0.11
CDH3-201ENST00000264012 EVPLLA8MZ36 301 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 RTN3O95197 1032 aaPredicted RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 DDX39BQ13838 428 aaKnown RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 MSL3Q8N5Y2 521 aaKnown RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 LPCAT1Q8NF37 534 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 OR9Q1Q8NGQ5 310 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 FAM162AQ96A26 154 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 EMILIN2Q9BXX0 1053 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 PRKD2Q9BZL6 878 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 ATXN3LQ9H3M9 355 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 TRIM16O95361 564 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 BTG3Q14201 252 aaPredicted RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 HSDL1Q3SXM5 330 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 PIGZQ86VD9 579 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 UCMAQ8WVF2 138 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 HES6Q96HZ4 224 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 VAT1Q99536 393 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 PRPF18Q99633 342 aaKnown RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 RBBP8Q99708 897 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 MRPL42Q9Y6G3 142 aaKnown RBP14.34□□□□□ -0.11
CDH3-201ENST00000264012 E9PBE3 544 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 SLCO1B7G3V0H7 640 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 KLHL41O60662 606 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 VAPBO95292 243 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 MYL4P12829 197 aa14.34□□□□□ -0.11
CDH3-201ENST00000264012 CDH2P19022 906 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms