RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 PNKPQ96T60 521 aa13.04□□□□□ -0.32
CLNS1A-201ENST00000263309 P2RY13Q9BPV8 354 aa13.04□□□□□ -0.32
CLNS1A-201ENST00000263309 CNPY3Q9BT09 278 aa13.04□□□□□ -0.32
CLNS1A-201ENST00000263309 SLC2A11Q9BYW1 496 aa13.04□□□□□ -0.32
CLNS1A-201ENST00000263309 HEBP1Q9NRV9 189 aa13.04□□□□□ -0.32
CLNS1A-201ENST00000263309 UVRAGQ9P2Y5 699 aa13.04□□□□□ -0.32
CLNS1A-201ENST00000263309 AGO1Q9UL18 857 aaKnown RBP13.04□□□□□ -0.32
CLNS1A-201ENST00000263309 INTUQ9ULD6 942 aa13.04□□□□□ -0.32
CLNS1A-201ENST00000263309 TBC1D3BA6NDS4 549 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 SPECC1L-ADORA2AF8WAN1 911 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 DDX3XO00571 662 aaKnown RBP eCLIP13.03□□□□□ -0.322e-22■■■□□ 15.8
CLNS1A-201ENST00000263309 MDM4O15151 490 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 TIMM44O43615 452 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 NARSO43776 548 aaKnown RBP13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 RRM1P23921 792 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 SSR1P43307 286 aaKnown RBP13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 PTPN9P43378 593 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 CLCN5P51795 746 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 ZNF143P52747 638 aaPredicted RBP13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 NUBP1P53384 320 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 STARD6P59095 220 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 ATP11AP98196 1134 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 GFPT1Q06210 699 aaPredicted RBP13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 DHCR24Q15392 516 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 EFHC2Q5JST6 749 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 SYPL2Q5VXT5 272 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 HGSNATQ68CP4 663 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 MON1BQ7L1V2 547 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 CHSY1Q86X52 802 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 BBS7Q8IWZ6 715 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 HJURPQ8NCD3 748 aaPredicted RBP13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 TTC8Q8TAM2 541 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 ZFYVE19Q96K21 471 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 MCEEQ96PE7 176 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 IER2Q9BTL4 223 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 IRF2BPLQ9H1B7 796 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 LINC00597Q9H2U6 94 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 RETREG1Q9H6L5 497 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 GTSE1Q9NYZ3 720 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 ARHGAP20Q9P2F6 1191 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 SLC8A2Q9UPR5 921 aa13.03□□□□□ -0.32
CLNS1A-201ENST00000263309 A0A087X0T9 212 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 FAM170BA6NMN3 283 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 EIF3CLB5ME19 914 aaKnown RBP13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 NEDD8-MDP1E9PL57 170 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 H0Y626 953 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 DAPK3O43293 454 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 PRPSAP2O60256 369 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 FAM228BP0C875 321 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 NNMTP40261 264 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 ZNF135P52742 658 aaPredicted RBP13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 TAF5Q15542 800 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 CDO1Q16878 200 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 ZC3H12AQ5D1E8 599 aaKnown RBP13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 LY6G5CQ5SRR4 150 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 MPP7Q5T2T1 576 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 TRIM68Q6AZZ1 485 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 GRAMD4Q6IC98 578 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 WDR59Q6PJI9 974 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 BMP8AQ7Z5Y6 402 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 SLFN11Q7Z7L1 901 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 PHLDB2Q86SQ0 1253 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 KIAA1328Q86T90 577 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 TAC4Q86UU9 113 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 ADAM32Q8TC27 787 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 C1orf74Q96LT6 269 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 HAPLN3Q96S86 360 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 EIF3CQ99613 913 aaKnown RBP13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 TKTL2Q9H0I9 626 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 SIK2Q9H0K1 926 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 TMEM59LQ9UK28 342 aa13.02□□□□□ -0.33
CLNS1A-201ENST00000263309 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 PRR33A8MZF0 331 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 MSI1O43347 362 aaKnown RBP13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 ATP5BP06576 529 aaKnown RBP13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 TMEM253P0C7T8 217 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 TYRP14679 529 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 GJA4P35212 333 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 RFC1P35251 1148 aaPredicted RBP13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 GRIA2P42262 883 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 ARHGAP25P42331 645 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 TNFRSF4P43489 277 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 DGKGP49619 791 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 ZNF177Q13360 481 aaPredicted RBP13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 MAMLD1Q13495 774 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 CDH18Q13634 790 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 BOLA3Q53S33 107 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 C2CD6Q53TS8 623 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 ASTLQ6HA08 431 aaPredicted RBP13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 PLEKHA7Q6IQ23 1121 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 POTEHQ6S545 545 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 FBXL6Q8N531 539 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 KCNV2Q8TDN2 545 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 FNIP1Q8TF40 1166 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 FAM172AQ8WUF8 416 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 PDLIM2Q96JY6 352 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 CFAP57Q96MR6 1250 aa13.01□□□□□ -0.33
CLNS1A-201ENST00000263309 TBCBQ99426 244 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms