RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 TXLNBQ8N3L3 684 aa17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 NIPA2Q8N8Q9 360 aa17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 RNF34Q969K3 372 aa17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 OTUB2Q96DC9 234 aa17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 ZFYVE19Q96K21 471 aa17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 NECAB3Q96P71 396 aaPredicted RBP17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 DUS2Q9NX74 493 aaKnown RBP17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 ARHGEF38Q9NXL2 777 aa17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 SALL4Q9UJQ4 1053 aa17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 STOML2Q9UJZ1 356 aa17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 PAXBP1Q9Y5B6 917 aa17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 WNT6Q9Y6F9 365 aa17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 DUSP10Q9Y6W6 482 aa17.27■□□□□ 0.35
CHCHD3-201ENST00000262570 MYO10Q9HD67 2058 aa17.26■□□□□ 0.35
CHCHD3-201ENST00000262570 A0A0U1RQJ8 604 aa17.26■□□□□ 0.35
CHCHD3-201ENST00000262570 GDI1P31150 447 aa17.26■□□□□ 0.35
CHCHD3-201ENST00000262570 KIF5AQ12840 1032 aa17.26■□□□□ 0.35
CHCHD3-201ENST00000262570 ADGRG2Q8IZP9 1017 aa17.26■□□□□ 0.35
CHCHD3-201ENST00000262570 ATRIPQ8WXE1 791 aa17.26■□□□□ 0.35
CHCHD3-201ENST00000262570 BTN2A3PQ96KV6 586 aa17.26■□□□□ 0.35
CHCHD3-201ENST00000262570 TKTL2Q9H0I9 626 aa17.26■□□□□ 0.35
CHCHD3-201ENST00000262570 ANLNQ9NQW6 1124 aa17.26■□□□□ 0.35
CHCHD3-201ENST00000262570 XPO7Q9UIA9 1087 aaKnown RBP17.26■□□□□ 0.35
CHCHD3-201ENST00000262570 LCMT1Q9UIC8 334 aa17.26■□□□□ 0.35
CHCHD3-201ENST00000262570 I6L893 689 aaPredicted RBP17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 ARNTLO00327 626 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 ACSL4O60488 711 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 LRCH4O75427 683 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 RNF8O76064 485 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 MOCS2O96007 188 aaPredicted RBP17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 CCDC175P0C221 793 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 ARHGAP25P42331 645 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 NOP2P46087 812 aaKnown RBP17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 SLC11A2P49281 568 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 MTA1Q13330 715 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 PDGFRLQ15198 375 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 EML3Q32P44 896 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 TRIM68Q6AZZ1 485 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 FAM217AQ8IXS0 508 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 ATP6V0D2Q8N8Y2 350 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 IRF7Q92985 503 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 NCAPGQ9BPX3 1015 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 BRD9Q9H8M2 597 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 SLC12A6Q9UHW9 1150 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 SORCS3Q9UPU3 1222 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 MUC3AQ02505 3323 aa17.25■□□□□ 0.35
CHCHD3-201ENST00000262570 PROSCO94903 275 aa17.24■□□□□ 0.35
CHCHD3-201ENST00000262570 PCK1P35558 622 aa17.24■□□□□ 0.35
CHCHD3-201ENST00000262570 CHKAP35790 457 aa17.24■□□□□ 0.35
CHCHD3-201ENST00000262570 IFNAR2P48551 515 aa17.24■□□□□ 0.35
CHCHD3-201ENST00000262570 ADGRF1Q5T601 910 aa17.24■□□□□ 0.35
CHCHD3-201ENST00000262570 EBF3Q9H4W6 596 aa17.24■□□□□ 0.35
CHCHD3-201ENST00000262570 TRPV5Q9NQA5 729 aa17.24■□□□□ 0.35
CHCHD3-201ENST00000262570 HPS4Q9NQG7 708 aa17.24■□□□□ 0.35
CHCHD3-201ENST00000262570 NARSO43776 548 aaKnown RBP17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 PAGE1O75459 146 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 SRFP11831 508 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 MIPP30301 263 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 ADRA1BP35368 520 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 TNK2Q07912 1038 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 MESDQ14696 234 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 ARL13BQ3SXY8 428 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 FAM133BQ5BKY9 247 aaKnown RBP17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 DAB2IPQ5VWQ8 1189 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 NADSYN1Q6IA69 706 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 SCYL2Q6P3W7 929 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 ZNF662Q6ZS27 426 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 CPXM2Q8N436 756 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 ATP2A3Q93084 1043 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 NTAN1Q96AB6 310 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 CALR3Q96L12 384 aaKnown RBP17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 UHRF1Q96T88 793 aaPredicted RBP17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 SLC2A4RGQ9NR83 387 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 TMPRSS4Q9NRS4 437 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 TRIM10Q9UDY6 481 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 DUSP12Q9UNI6 340 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 PPP2R2CQ9Y2T4 447 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 OTOL1A6NHN0 477 aaPredicted RBP17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 GFRA2O00451 464 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 BUB1O43683 1085 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 ARSAP15289 507 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 MAN1A1P33908 653 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 MLLT6P55198 1093 aaPredicted RBP17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 RUNX3Q13761 415 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 MS4A13Q5J8X5 152 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 PIK3R6Q5UE93 754 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 RHBDF2Q6PJF5 856 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 CCDC185Q8N715 623 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 C1orf74Q96LT6 269 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 HAPLN3Q96S86 360 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 PRMT1Q99873 361 aaKnown RBP17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 TSGA10Q9BZW7 698 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 ECT2Q9H8V3 914 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 GTSE1Q9NYZ3 720 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 USP18Q9UMW8 372 aa17.23■□□□□ 0.35
CHCHD3-201ENST00000262570 TRIOO75962 3097 aa17.22■□□□□ 0.35
CHCHD3-201ENST00000262570 KIF26AQ9ULI4 1882 aaPredicted RBP17.22■□□□□ 0.35
CHCHD3-201ENST00000262570 GOLGA6L7A0A1B0GV03 622 aa17.22■□□□□ 0.35
CHCHD3-201ENST00000262570 KRT86O43790 486 aa17.22■□□□□ 0.35
CHCHD3-201ENST00000262570 BUB1BO60566 1050 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms