RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 CD72P21854 359 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 EIF4A3P38919 411 aaKnown RBP19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 DGKKQ5KSL6 1271 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 BRMS1LQ5PSV4 323 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 IER5LQ5T953 404 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 PHLDB2Q86SQ0 1253 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 TMEM25Q86YD3 366 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 DDI1Q8WTU0 396 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 SLC39A13Q96H72 371 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 FCRL2Q96LA5 508 aaPredicted RBP19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 ISCUQ9H1K1 167 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 WDCPQ9H6R7 721 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 TAS2R14Q9NYV8 317 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 MARK1Q9P0L2 795 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 ARHGAP20Q9P2F6 1191 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 STOML2Q9UJZ1 356 aa19.48■□□□□ 0.71
CYSTM1-201ENST00000261811 NEDD8-MDP1E9PL57 170 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 MOCS2O96007 188 aaPredicted RBP19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 PDGFBP01127 241 aaPredicted RBP19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 PLEKP08567 350 aaPredicted RBP19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 GPD1P21695 349 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 RRM1P23921 792 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 CDC25BP30305 580 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 FLT3P36888 993 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 MAPK8IP2Q13387 824 aaPredicted RBP19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 PON2Q15165 354 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 ZC3H12AQ5D1E8 599 aaKnown RBP19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 CCDC122Q5T0U0 273 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 ALKBH5Q6P6C2 394 aaKnown RBP19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 CCDC117Q8IWD4 279 aaPredicted RBP19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 FAM217AQ8IXS0 508 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 SYNPOQ8N3V7 929 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 ZNF557Q8N988 423 aaPredicted RBP19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 RXFP2Q8WXD0 754 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 NT5C3BQ969T7 300 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 ZNF653Q96CK0 615 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 PNKPQ96T60 521 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 LRFN3Q9BTN0 628 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 FOXQ1Q9C009 403 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 C11orf16Q9NQ32 467 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 DEC1Q9P2X7 70 aa19.47■□□□□ 0.71
CYSTM1-201ENST00000261811 COL4A3Q01955 1670 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 A0A087X0T9 212 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 KCNU1A8MYU2 1149 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 ADCY5O95622 1261 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 FAM228BP0C875 321 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 TYRP14679 529 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 RDXP35241 583 aaKnown RBP19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 PTPN9P43378 593 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 GALK1P51570 392 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 SLC18A3Q16572 532 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 ARL13BQ3SXY8 428 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 FBXO43Q4G163 708 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 WDR59Q6PJI9 974 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 EMC1Q8N766 993 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 TMA16Q96EY4 203 aaKnown RBP19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 CFAP57Q96MR6 1250 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 TBCBQ99426 244 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 IER2Q9BTL4 223 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 IMPACTQ9P2X3 320 aa19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 CNOT8Q9UFF9 292 aaKnown RBP19.46■□□□□ 0.71
CYSTM1-201ENST00000261811 C2CD4BA6NLJ0 364 aa19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 APODP05090 189 aa19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 TARSP26639 723 aaKnown RBP19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 RFC1P35251 1148 aaPredicted RBP19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 RPS9P46781 194 aaKnown RBP19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 NUBP1P53384 320 aa19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 ATP11AP98196 1134 aa19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 EIF4EBP2Q13542 120 aaPredicted RBP19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 TMEM196Q5HYL7 178 aa19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 CWF19L1Q69YN2 538 aaKnown RBP19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 TXNDC11Q6PKC3 985 aa19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 STRADAQ7RTN6 431 aa19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 MCEEQ96PE7 176 aa19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 SLC2A11Q9BYW1 496 aa19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 NHEJ1Q9H9Q4 299 aaPredicted RBP19.45■□□□□ 0.7
CYSTM1-201ENST00000261811 ZDBF2Q9HCK1 2354 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 F5H5T6 163 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 CACNG3O60359 315 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 AVPR2P30518 371 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 CXCR3P49682 368 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 PITX1P78337 314 aaPredicted RBP19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 MAMLD1Q13495 774 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 E2F5Q15329 346 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 MPP7Q5T2T1 576 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 PLEKHA7Q6IQ23 1121 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 CHSY1Q86X52 802 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 CCDC105Q8IYK2 499 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 NAT16Q8N8M0 369 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 HJURPQ8NCD3 748 aaPredicted RBP19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 JOSD2Q8TAC2 188 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 OLIG1Q8TAK6 271 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 PANX2Q96RD6 677 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 PRRX2Q99811 253 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 NCAPGQ9BPX3 1015 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 LMAN1LQ9HAT1 526 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 ARHGEF4Q9NR80 690 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 PIGVQ9NUD9 493 aa19.44■□□□□ 0.7
CYSTM1-201ENST00000261811 MYO1AQ9UBC5 1043 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms