RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 RAB27AP51159 221 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 RPS6KA3P51812 740 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 CDH15P55291 814 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 PPIDQ08752 370 aaKnown RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 MOGSQ13724 837 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 TMEM132DQ14C87 1099 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 SUPT20HL1Q3ZLR7 823 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 ANGEL2Q5VTE6 544 aaKnown RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 PLEKHA7Q6IQ23 1121 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 DPY19L2P1Q6NXN4 242 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 PPP1R2P3Q6NXS1 205 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 ARPINQ7Z6K5 226 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 CTU1Q7Z7A3 348 aaKnown RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 CLVS1Q8IUQ0 354 aaPredicted RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 MICALL2Q8IY33 904 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 ANKLE1Q8NAG6 615 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 ZNF280CQ8ND82 737 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 HASPINQ8TF76 798 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 CLEC4CQ8WTT0 213 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 SEPHS2Q99611 448 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 SNRNP25Q9BV90 132 aaKnown RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 OXCT2Q9BYC2 517 aaPredicted RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 UBE2OQ9C0C9 1292 aaKnown RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 XPNPEP3Q9NQH7 507 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 CHD4Q14839 1912 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 UBA6A0AVT1 1052 aaPredicted RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 ARHGEF37A1IGU5 675 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 LACTBL1A8MY62 500 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 WDR46O15213 610 aaKnown RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 HNRNPCL1O60812 293 aaKnown RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 METTL18O95568 372 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 CCR3P51677 355 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 HDAC4P56524 1084 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 YWHAZP63104 245 aaKnown RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 YWHAHQ04917 246 aaPredicted RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 CSHL1Q14406 222 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 CARTPTQ16568 116 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 GRAMD4Q6IC98 578 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 SCIMPQ6UWF3 145 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 EXOC8Q8IYI6 725 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 MBOAT7Q96N66 472 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 LENG8Q96PV6 779 aaPredicted RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 SIKE1Q9BRV8 207 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 FSD1LQ9BXM9 530 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 PAIP1Q9H074 479 aaKnown RBP10.39□□□□□ -0.75
PALB2-201ENST00000261584 ING2Q9H160 280 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 KRT82Q9NSB4 513 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 THAP1Q9NVV9 213 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 EGFL7Q9UHF1 273 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 LGALS13Q9UHV8 139 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 ADGRA2Q96PE1 1338 aa10.39□□□□□ -0.75
PALB2-201ENST00000261584 KPNA7A9QM74 516 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 WNT10BO00744 389 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 XPOTO43592 962 aaKnown RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 C4BPAP04003 597 aaKnown RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 ALADP13716 330 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 PTGER2P43116 358 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 EN1Q05925 392 aaPredicted RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 PTK2BQ14289 1009 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 EFHC2Q5JST6 749 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 TMEM176AQ96HP8 235 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 TRIM8Q9BZR9 551 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 TSPYL2Q9H2G4 693 aaPredicted RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 TMEM216Q9P0N5 145 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 HBS1LQ9Y450 684 aaKnown RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 HEMK1Q9Y5R4 338 aaPredicted RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 PRPF4O43172 522 aaKnown RBP eCLIP10.38□□□□□ -0.75
PALB2-201ENST00000261584 POLBP06746 335 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 CHRNGP07510 517 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 HMBSP08397 361 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 ZNF286BP0CG31 522 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 ADORA2AP29274 412 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 CA8P35219 290 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 SKIV2L2P42285 1042 aaKnown RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 SLC15A2Q16348 729 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 ZIK1Q3SY52 487 aaPredicted RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 LDLRAP1Q5SW96 308 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 BNC2Q6ZN30 1099 aaPredicted RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 ATP6V1E2Q96A05 226 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 CNDP1Q96KN2 507 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 MFSD14AQ96MC6 490 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 CCDC134Q9H6E4 229 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 AS3MTQ9HBK9 375 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 PLLPQ9Y342 182 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 RBMX2Q9Y388 322 aaKnown RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 PHRF1Q9P1Y6 1649 aaKnown RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 RNF103O00237 685 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 VWA5AO00534 786 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 SIN3BO75182 1162 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 GMNNO75496 209 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 SUPT7LO94864 414 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 PSMD7P51665 324 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 GRIK3Q13003 919 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 CTBP1Q13363 440 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 LPCAT2Q7L5N7 544 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 ZNF781Q8N8C0 355 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 DCBLD1Q8N8Z6 715 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 GABPB2Q8TAK5 448 aaPredicted RBP10.38□□□□□ -0.75
PALB2-201ENST00000261584 DCAKDQ8WVC6 231 aa10.38□□□□□ -0.75
PALB2-201ENST00000261584 TFB1MQ8WVM0 346 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms