RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ZNF840PA6NDX5 716 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 INO80B-WBP1J3KQ70 363 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 PPP6CO00743 305 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 NPC1O15118 1278 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 COCHO43405 550 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 ALDOAP04075 364 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 RALAP11233 206 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 TNFRSF8P28908 595 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 ZNF844Q08AG5 666 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 STIM1Q13586 685 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 PRSS53Q2L4Q9 553 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 KDELC1Q6UW63 502 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SLC24A5Q71RS6 500 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 ANKRD52Q8NB46 1076 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SLAIN1Q8ND83 568 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SLC7A3Q8WY07 619 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 FGF14Q92915 247 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 MCEEQ96PE7 176 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 INO80BQ9C086 356 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 ELAC1Q9H777 363 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 VPS45Q9NRW7 570 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 CDYLQ9Y232 598 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 PIN4Q9Y237 131 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 PRR14LQ5THK1 2151 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 ARHGEF37A1IGU5 675 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SHOX2O60902 331 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SPATA31D3P0C874 917 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 PTPN1P18031 435 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SLC5A3P53794 718 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 HYAL1Q12794 435 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 MAPK6Q16659 721 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SGSM1Q2NKQ1 1148 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SPATA31D4Q6ZUB0 917 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 OTOP2Q7RTS6 562 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 HERVK_113Q902F9 699 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 MYLPFQ96A32 169 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 KLF16Q9BXK1 252 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 LRRC27Q9C0I9 530 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 PNMA3Q9UL41 463 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SAMM50Q9Y512 469 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 MACROD2A1Z1Q3 448 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 PODXLO00592 558 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 NRP2O60462 931 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 USP17L7P0C7H9 530 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 KDELR1P24390 212 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 MPPE1Q53F39 396 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SDK2Q58EX2 2172 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 INTS6LQ5JSJ4 861 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 NKD2Q969F2 451 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 AZIN2Q96A70 460 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 HHIPQ96QV1 700 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 C11orf70Q9BRQ4 267 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SUN2Q9UH99 717 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SLC4A7Q9Y6M7 1214 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 DRGXA6NNA5 263 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 EXOC3O60645 756 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 PQBP1O60828 265 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 BDNFP23560 247 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 MZF1P28698 734 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SYCP2LQ5T4T6 812 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 C1orf216Q8TAB5 229 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 CAGE1Q8TC20 777 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 GRIN3AQ8TCU5 1115 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 STK32AQ8WU08 396 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 PRCCQ92733 491 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 FAXDC2Q96IV6 333 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 CDHR1Q96JP9 859 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 TMEM121Q9BTD3 319 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 TMEM161AQ9NX61 479 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 MOCS1Q9NZB8 636 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 TTLL3Q9Y4R7 772 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 HOXB9P17482 250 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 ABCB4P21439 1286 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 SCP2P22307 547 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 LHCGRP22888 699 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 FCGRTP55899 365 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 MS4A13Q5J8X5 152 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 ZNF551Q7Z340 670 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 PALM2Q8IXS6 379 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 PPM1KQ8N3J5 372 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 NXPE3Q969Y0 559 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 ZNF524Q96C55 264 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 PPP1R12CQ9BZL4 782 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 HPCAL4Q9UM19 191 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 PPME1Q9Y570 386 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 SPO11Q9Y5K1 396 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 GAS2O43903 313 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 RFPL1O75677 317 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 WISP1O95388 367 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 T-ENOLP0DO92 83 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 ACVRL1P37023 503 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 ZNF143P52747 638 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 CRYBA2P53672 197 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 KCNV1Q6PIU1 500 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 ADAT2Q7Z6V5 191 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 KATNAL2Q8IYT4 538 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 SH2D3CQ8N5H7 860 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms