RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 APOL1O14791 398 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 MSI1O43347 362 aaKnown RBP9.8□□□□□ -0.84
NIP7-202ENST00000254941 RB1P06400 928 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 ITGAVP06756 1048 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 ADH1AP07327 375 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 MYBL2P10244 700 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 RARGP13631 454 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 MYOGP15173 224 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 PECAM1P16284 738 aaPredicted RBP9.8□□□□□ -0.84
NIP7-202ENST00000254941 ZFXP17010 805 aaPredicted RBP9.8□□□□□ -0.84
NIP7-202ENST00000254941 HCAR3P49019 387 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 CARSP49589 748 aaKnown RBP9.8□□□□□ -0.84
NIP7-202ENST00000254941 ZNF135P52742 658 aaPredicted RBP9.8□□□□□ -0.84
NIP7-202ENST00000254941 CUL1Q13616 776 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 VEPH1Q14D04 833 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 SHHQ15465 462 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 TRADDQ15628 312 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 COL13A1Q5TAT6 717 aaPredicted RBP9.8□□□□□ -0.84
NIP7-202ENST00000254941 LILRA6Q6PI73 481 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 MRPL43Q8N983 215 aaKnown RBP9.8□□□□□ -0.84
NIP7-202ENST00000254941 CASKIN2Q8WXE0 1202 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.8□□□□□ -0.84
NIP7-202ENST00000254941 P3H4Q92791 437 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 RNF34Q969K3 372 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 HAUS1Q96CS2 278 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 SLC39A13Q96H72 371 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 HAPLN3Q96S86 360 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 TCF25Q9BQ70 676 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 C17orf80Q9BSJ5 609 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 TLR9Q9NR96 1032 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 NEU2Q9Y3R4 380 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 INSL5Q9Y5Q6 135 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 PDE4DIPQ5VU43 2346 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 CCDC85CA6NKD9 419 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 GRXCR1A8MXD5 290 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 KCNU1A8MYU2 1149 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 FAM72CH0Y354 149 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 H3BRJ5 948 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 DAPK3O43293 454 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 TGM5O43548 720 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 TLR5O60602 858 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 ARHGEF15O94989 841 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 SLC2A3P11169 496 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 DNAJB1P25685 340 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 NR2C2P49116 596 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 EPHB3P54753 998 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 TWF1Q12792 350 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 DPYSQ14117 519 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 NOMO1Q15155 1222 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 PPP1R7Q15435 360 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 KCTD19Q17RG1 926 aaPredicted RBP9.79□□□□□ -0.84
NIP7-202ENST00000254941 MAP9Q49MG5 647 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 BEND6Q5SZJ8 279 aaPredicted RBP9.79□□□□□ -0.84
NIP7-202ENST00000254941 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
NIP7-202ENST00000254941 FAM72AQ5TYM5 149 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 FAM109BQ6ICB4 259 aaPredicted RBP9.79□□□□□ -0.84
NIP7-202ENST00000254941 FAM72DQ6L9T8 149 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 TMCO3Q6UWJ1 677 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 FAM72BQ86X60 149 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 POF1BQ8WVV4 589 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 IFT81Q8WYA0 676 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 PSMG2Q969U7 264 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 CCDC114Q96M63 670 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 KLHL5Q96PQ7 755 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 CDK5RAP1Q96SZ6 601 aaKnown RBP9.79□□□□□ -0.84
NIP7-202ENST00000254941 EMILIN2Q9BXX0 1053 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 OSBPL2Q9H1P3 480 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 ENTPD7Q9NQZ7 604 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 ARHGEF4Q9NR80 690 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 MARCH2Q9P0N8 246 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 OR12D3Q9UGF7 316 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 ZNF148Q9UQR1 794 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 REV3LO60673 3130 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 ZNF840PA6NDX5 716 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 C2orf71A6NGG8 1288 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 EEF2KO00418 725 aaKnown RBP9.79□□□□□ -0.84
NIP7-202ENST00000254941 MCF2LO15068 1137 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 CREB3O43889 395 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 TBX18O95935 607 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 RBP3P10745 1247 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 AMPD1P23109 780 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 ECHS1P30084 290 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 CA8P35219 290 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 PPP3CCP48454 512 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 EIF3EP60228 445 aaKnown RBP9.79□□□□□ -0.84
NIP7-202ENST00000254941 EFEMP1Q12805 493 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 PLD1Q13393 1074 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 PTK6Q13882 451 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 TAF12Q16514 161 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 C10orf120Q5SQS8 335 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 KLHDC10Q6PID8 442 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 NPNTQ6UXI9 565 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 RFX8Q6ZV50 586 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 SPRED2Q7Z698 418 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 DNAJB7Q7Z6W7 309 aaPredicted RBP9.79□□□□□ -0.84
NIP7-202ENST00000254941 DDX42Q86XP3 938 aaKnown RBP eCLIP9.79□□□□□ -0.84
NIP7-202ENST00000254941 ALLCQ8N6M5 410 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 AENQ8WTP8 325 aaKnown RBP9.79□□□□□ -0.84
NIP7-202ENST00000254941 ZNF512Q96ME7 567 aaPredicted RBP9.79□□□□□ -0.84
NIP7-202ENST00000254941 SAMD11Q96NU1 681 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms