RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 TMC7Q7Z402 723 aa13.83□□□□□ -0.2
H3F3B-201ENST00000254810 ARPINQ7Z6K5 226 aa13.83□□□□□ -0.2
H3F3B-201ENST00000254810 WDR75Q8IWA0 830 aaKnown RBP13.83□□□□□ -0.2
H3F3B-201ENST00000254810 METTL25Q8N6Q8 603 aa13.83□□□□□ -0.2
H3F3B-201ENST00000254810 OPTNQ96CV9 577 aa13.83□□□□□ -0.2
H3F3B-201ENST00000254810 MOCOSQ96EN8 888 aa13.83□□□□□ -0.2
H3F3B-201ENST00000254810 CNPY3Q9BT09 278 aa13.83□□□□□ -0.2
H3F3B-201ENST00000254810 MRPL4Q9BYD3 311 aaKnown RBP13.83□□□□□ -0.2
H3F3B-201ENST00000254810 HSFX1Q9UBD0 423 aa13.83□□□□□ -0.2
H3F3B-201ENST00000254810 ITGA11Q9UKX5 1188 aa13.83□□□□□ -0.2
H3F3B-201ENST00000254810 PCDHA11Q9Y5I1 949 aa13.83□□□□□ -0.2
H3F3B-201ENST00000254810 RLFQ13129 1914 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.82□□□□□ -0.2
H3F3B-201ENST00000254810 BCLAF3A2AJT9 711 aaKnown RBP13.82□□□□□ -0.2
H3F3B-201ENST00000254810 APOL1O14791 398 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 VILLO15195 856 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 MED7O43513 233 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 PRPSAP2O60256 369 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 NCF2P19878 526 aaPredicted RBP13.82□□□□□ -0.2
H3F3B-201ENST00000254810 RGS7P49802 495 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 USP4Q13107 963 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 ANKRD20A4Q4UJ75 823 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 PAOXQ6QHF9 649 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 TIFABQ6ZNK6 161 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 C1orf127Q8N9H9 656 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 FAM81AQ8TBF8 368 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 XPNPEP3Q9NQH7 507 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 ACSS2Q9NR19 701 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 DCXO43602 365 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 PRKCBP05771 671 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 CHN2P52757 468 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 ATXN1P54253 815 aaKnown RBP13.82□□□□□ -0.2
H3F3B-201ENST00000254810 TBL3Q12788 808 aaKnown RBP13.82□□□□□ -0.2
H3F3B-201ENST00000254810 SNAPC2Q13487 334 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 GRAMD1BQ3KR37 738 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 PPP6R3Q5H9R7 873 aaPredicted RBP13.82□□□□□ -0.2
H3F3B-201ENST00000254810 WDR78Q5VTH9 848 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 SLC9A4Q6AI14 798 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 OR6B2Q6IFH4 312 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 KBTBD6Q86V97 674 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 MCUQ8NE86 351 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 OLFM3Q96PB7 478 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 VCX3BQ9H321 246 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 VCX3AQ9NNX9 186 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 NGRNQ9NPE2 291 aaKnown RBP13.82□□□□□ -0.2
H3F3B-201ENST00000254810 TMEM216Q9P0N5 145 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 SORCS3Q9UPU3 1222 aa13.82□□□□□ -0.2
H3F3B-201ENST00000254810 CILPO75339 1184 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 KLHL2O95198 593 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 PFKMP08237 780 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 MSX2P35548 267 aaPredicted RBP13.81□□□□□ -0.2
H3F3B-201ENST00000254810 FBXW8Q8N3Y1 598 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 RNF149Q8NC42 400 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 MAPK15Q8TD08 544 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 MPP4Q96JB8 637 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 SNRNP25Q9BV90 132 aaKnown RBP13.81□□□□□ -0.2
H3F3B-201ENST00000254810 IGKV6D-21A0A0A0MT36 114 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 TFAP2AP05549 437 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 LAMTOR4Q0VGL1 99 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 ZNF667Q5HYK9 610 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 PACS1Q6VY07 963 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 ILDR2Q71H61 639 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 C12orf29Q8N999 325 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 TMEM176AQ96HP8 235 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 ZBED3Q96IU2 234 aaPredicted RBP13.81□□□□□ -0.2
H3F3B-201ENST00000254810 PRICKLE1Q96MT3 831 aaPredicted RBP13.81□□□□□ -0.2
H3F3B-201ENST00000254810 MTMR10Q9NXD2 777 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 PHF24Q9UPV7 400 aa13.81□□□□□ -0.2
H3F3B-201ENST00000254810 E9PBE3 544 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 CASQ2O14958 399 aaPredicted RBP13.8□□□□□ -0.2
H3F3B-201ENST00000254810 KLHL41O60662 606 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 TNNC2P02585 160 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 SERPINE1P05121 402 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 NIPAL4Q0D2K0 466 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 ITGA9Q13797 1035 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 SLC9B1Q4ZJI4 515 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 OGFRL1Q5TC84 451 aaPredicted RBP13.8□□□□□ -0.2
H3F3B-201ENST00000254810 CES3Q6UWW8 571 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 NAPRTQ6XQN6 538 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 TRIM50Q86XT4 487 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 TNS4Q8IZW8 715 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 CXorf38Q8TB03 319 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 KHSRPQ92945 711 aaKnown RBP eCLIP13.8□□□□□ -0.22e-30■□□□□ 8.9
H3F3B-201ENST00000254810 PGBD4Q96DM1 585 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 HEXIM2Q96MH2 286 aaKnown RBP13.8□□□□□ -0.2
H3F3B-201ENST00000254810 PREBQ9HCU5 417 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 LMCD1Q9NZU5 365 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 PTPRFP10586 1907 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 ASLP04424 464 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 ITGB3P05106 788 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 ATP5BP06576 529 aaKnown RBP13.8□□□□□ -0.2
H3F3B-201ENST00000254810 TGM2P21980 687 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 UBA1P22314 1058 aaKnown RBP13.8□□□□□ -0.2
H3F3B-201ENST00000254810 ACAP1Q15027 740 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 LRRC23Q53EV4 343 aaPredicted RBP13.8□□□□□ -0.2
H3F3B-201ENST00000254810 PPM1LQ5SGD2 360 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 RBM44Q6ZP01 1051 aaKnown RBP13.8□□□□□ -0.2
H3F3B-201ENST00000254810 FAM43BQ6ZT52 329 aaPredicted RBP13.8□□□□□ -0.2
H3F3B-201ENST00000254810 CMC1Q7Z7K0 106 aa13.8□□□□□ -0.2
H3F3B-201ENST00000254810 AGR3Q8TD06 166 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms