RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SLC44A3Q8N4M1 653 aa14.65□□□□□ -0.06
VPS25-201ENST00000253794 RNF10Q8N5U6 811 aaKnown RBP14.65□□□□□ -0.06
VPS25-201ENST00000253794 C1orf74Q96LT6 269 aa14.65□□□□□ -0.06
VPS25-201ENST00000253794 ZNF830Q96NB3 372 aaPredicted RBP14.65□□□□□ -0.06
VPS25-201ENST00000253794 TRMT61BQ9BVS5 477 aaKnown RBP14.65□□□□□ -0.06
VPS25-201ENST00000253794 WDCPQ9H6R7 721 aa14.65□□□□□ -0.06
VPS25-201ENST00000253794 TFR2Q9UP52 801 aa14.65□□□□□ -0.06
VPS25-201ENST00000253794 PPP2R2CQ9Y2T4 447 aa14.65□□□□□ -0.06
VPS25-201ENST00000253794 I6L893 689 aaPredicted RBP14.64□□□□□ -0.07
VPS25-201ENST00000253794 KRT86O43790 486 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 ACSL4O60488 711 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 RNF8O76064 485 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 HMBSP08397 361 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 IRF1P10914 325 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 SLC1A1P43005 524 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 ATXN1P54253 815 aaKnown RBP14.64□□□□□ -0.07
VPS25-201ENST00000253794 NRG1Q02297 640 aaPredicted RBP14.64□□□□□ -0.07
VPS25-201ENST00000253794 CDO1Q16878 200 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 EML3Q32P44 896 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 RAB6CQ53S08 254 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 RNF43Q68DV7 783 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 CYP4V2Q6ZWL3 525 aaPredicted RBP14.64□□□□□ -0.07
VPS25-201ENST00000253794 FAM131BQ86XD5 332 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 PSTKQ8IV42 348 aaKnown RBP14.64□□□□□ -0.07
VPS25-201ENST00000253794 BBS7Q8IWZ6 715 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 ATP6V0D2Q8N8Y2 350 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 TPCN2Q8NHX9 752 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 UBE2Q2Q8WVN8 375 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 RSAD2Q8WXG1 361 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 ASIC4Q96FT7 647 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 BTBD6Q96KE9 485 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 HAPLN3Q96S86 360 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 PRMT1Q99873 361 aaKnown RBP14.64□□□□□ -0.07
VPS25-201ENST00000253794 TKTL2Q9H0I9 626 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 RAB6CQ9H0N0 254 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 ANLNQ9NQW6 1124 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 SLC2A4RGQ9NR83 387 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 SLC12A6Q9UHW9 1150 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 DUSP10Q9Y6W6 482 aa14.64□□□□□ -0.07
VPS25-201ENST00000253794 VCANP13611 3396 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 A0A0U1RQJ8 604 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 MIPP30301 263 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 ADRA1BP35368 520 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 CHKAP35790 457 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 SLC11A2P49281 568 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 MLLT6P55198 1093 aaPredicted RBP14.63□□□□□ -0.07
VPS25-201ENST00000253794 SLC25A11Q02978 314 aaKnown RBP14.63□□□□□ -0.07
VPS25-201ENST00000253794 TDGQ13569 410 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 IFI16Q16666 785 aaKnown RBP14.63□□□□□ -0.07
VPS25-201ENST00000253794 ARL13BQ3SXY8 428 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 C5orf22Q49AR2 442 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 HS1BP3Q53T59 392 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 FAM133BQ5BKY9 247 aaKnown RBP14.63□□□□□ -0.07
VPS25-201ENST00000253794 ARTNQ5T4W7 220 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 ADGRF1Q5T601 910 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 NADSYN1Q6IA69 706 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 CC2D1AQ6P1N0 951 aaPredicted RBP14.63□□□□□ -0.07
VPS25-201ENST00000253794 DENND1CQ8IV53 801 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 YAF2Q8IY57 180 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 ADGRG2Q8IZP9 1017 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 ATRIPQ8WXE1 791 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 DNASE1L2Q92874 299 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 DDX50Q9BQ39 737 aaKnown RBP14.63□□□□□ -0.07
VPS25-201ENST00000253794 OSBPL2Q9H1P3 480 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 KCND1Q9NSA2 647 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 DUS2Q9NX74 493 aaKnown RBP14.63□□□□□ -0.07
VPS25-201ENST00000253794 MARK1Q9P0L2 795 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 COL4A2P08572 1712 aa14.63□□□□□ -0.07
VPS25-201ENST00000253794 SYNJ2BP-COX16A0A087WUM0 186 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 ZSCAN12O43309 604 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 BUB1BO60566 1050 aaPredicted RBP14.62□□□□□ -0.07
VPS25-201ENST00000253794 PAGE1O75459 146 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 ASGR2P07307 311 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 SRFP11831 508 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 IFNAR2P48551 515 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 GRM2Q14416 872 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 MS4A13Q5J8X5 152 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 PIK3R6Q5UE93 754 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 LRRC38Q5VT99 294 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 POLNQ7Z5Q5 900 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 SLFN11Q7Z7L1 901 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 REXO1L1PQ8IX06 675 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 GJD3Q8N144 294 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 CCDC185Q8N715 623 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 LRRC57Q8N9N7 239 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 TEKT4Q8WW24 435 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 IRF7Q92985 503 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 ATP2A3Q93084 1043 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 RNF34Q969K3 372 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 PEBP4Q96S96 227 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 LINC00597Q9H2U6 94 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 HPS4Q9NQG7 708 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 COX16Q9P0S2 106 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 XPO7Q9UIA9 1087 aaKnown RBP14.62□□□□□ -0.07
VPS25-201ENST00000253794 FZD10Q9ULW2 581 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 USP18Q9UMW8 372 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 DUSP12Q9UNI6 340 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 SORCS3Q9UPU3 1222 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 WNT6Q9Y6F9 365 aa14.62□□□□□ -0.07
VPS25-201ENST00000253794 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms