RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 EIF4EBP2Q13542 120 aaPredicted RBP25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 NAA35Q5VZE5 725 aa25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 TRMT11Q7Z4G4 463 aaKnown RBP25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 XYLT1Q86Y38 959 aa25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 CPA5Q8WXQ8 436 aa25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 NKD2Q969F2 451 aaPredicted RBP25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 TMA16Q96EY4 203 aaKnown RBP25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 NUP58Q9BVL2 599 aa25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 PLK2Q9NYY3 685 aa25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 SLC12A6Q9UHW9 1150 aa25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 STAP1Q9ULZ2 295 aa25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 SLC27A6Q9Y2P4 619 aa25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 CCDC163A0A0D9SF12 145 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 LILRB5O75023 590 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 CISD3P0C7P0 127 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 MATKP42679 507 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 KIR2DL1P43626 348 aaPredicted RBP25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 MRE11P49959 708 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 ARID5AQ03989 594 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 MESP2Q0VG99 397 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 E2F5Q15329 346 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 C2orf27AQ580R0 203 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 FIGNQ5HY92 759 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 C10orf76Q5T2E6 689 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 MPP7Q5T2T1 576 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 LRSAM1Q6UWE0 723 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 ATP6V0D2Q8N8Y2 350 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 ZNF557Q8N988 423 aaPredicted RBP25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 ADAM32Q8TC27 787 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 BHMTQ93088 406 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 PHOX2BQ99453 314 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 FAM204AQ9H8W3 233 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 MMP17Q9ULZ9 603 aa25.3■■□□□ 1.64
SDF2L1-201ENST00000248958 TYW5A2RUC4 315 aaKnown RBP25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 GFRA2O00451 464 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 GRAP2O75791 330 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 CNR2P34972 360 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 DMC1Q14565 340 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 FAM102AQ5T9C2 384 aaPredicted RBP25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 ARCQ7LC44 396 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 LONP2Q86WA8 852 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 BAP1Q92560 729 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 BTN2A3PQ96KV6 586 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 AGPAT1Q99943 283 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 TSPY26PQ9H489 355 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 C2orf42Q9NWW7 574 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 DDIT4Q9NX09 232 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.29■■□□□ 1.646e-7■■■■□ 24.1
SDF2L1-201ENST00000248958 R4GN57 208 aa25.29■■□□□ 1.64
SDF2L1-201ENST00000248958 UNGP13051 313 aaPredicted RBP25.28■■□□□ 1.64
SDF2L1-201ENST00000248958 MMP8P22894 467 aa25.28■■□□□ 1.64
SDF2L1-201ENST00000248958 CCR1P32246 355 aa25.28■■□□□ 1.64
SDF2L1-201ENST00000248958 TIE1P35590 1138 aa25.28■■□□□ 1.64
SDF2L1-201ENST00000248958 EOGTQ5NDL2 527 aa25.28■■□□□ 1.64
SDF2L1-201ENST00000248958 PPP1R2P3Q6NXS1 205 aa25.28■■□□□ 1.64
SDF2L1-201ENST00000248958 IQCDQ96DY2 449 aa25.28■■□□□ 1.64
SDF2L1-201ENST00000248958 TRIM24O15164 1050 aa25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 TSPAN3O60637 253 aa25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 F9P00740 461 aa25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 TPM3P06753 285 aa25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 ABCB4P21439 1286 aa25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 NSFP46459 744 aaKnown RBP25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 CENPCQ03188 943 aa25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 FAM133BQ5BKY9 247 aaKnown RBP25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 ZC3H12AQ5D1E8 599 aaKnown RBP25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 PIK3R6Q5UE93 754 aa25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 IRF2BP2Q7Z5L9 587 aa25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 WDR5BQ86VZ2 330 aa25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 ZNF513Q8N8E2 541 aaPredicted RBP25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 IL17RCQ8NAC3 791 aa25.27■■□□□ 1.64
SDF2L1-201ENST00000248958 LRRC53A6NM62 1247 aa25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 HOXD9P28356 352 aaPredicted RBP25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 PITX1P78337 314 aaPredicted RBP25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 CLEC16AQ2KHT3 1053 aa25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 NADSYN1Q6IA69 706 aa25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 SFTPA1Q8IWL2 248 aa25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 UCMAQ8WVF2 138 aa25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 RNF34Q969K3 372 aa25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 PGAP3Q96FM1 320 aaPredicted RBP25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 P2RY11Q96G91 374 aa25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 PCDHB18PQ96TA0 734 aa25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 NPY6RQ99463 290 aa25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 TTYH3Q9C0H2 523 aa25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 SEPT11Q9NVA2 429 aaKnown RBP25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 AIPL1Q9NZN9 384 aa25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 PAXBP1Q9Y5B6 917 aa25.26■■□□□ 1.63
SDF2L1-201ENST00000248958 GOLGA6L7A0A1B0GV03 622 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 KCNU1A8MYU2 1149 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 M0QYT0 321 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 NPC1O15118 1278 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 KLF8O95600 359 aaPredicted RBP25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 APBB3O95704 486 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 MOCS2O96007 188 aaPredicted RBP25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 CALB1P05937 261 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 CHRM1P11229 460 aaPredicted RBP25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 SLC6A4P31645 630 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 FNTBP49356 437 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 DGKEP52429 567 aa25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 GSCP56915 257 aaPredicted RBP25.25■■□□□ 1.63
SDF2L1-201ENST00000248958 RNASE9P60153 205 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms