RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CTGFP29279 349 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 ACADSBP45954 432 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 IRX4P78413 519 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 ELF3P78545 371 aaPredicted RBP16.28■□□□□ 0.2
LRFN1-201ENST00000248668 MRPS5P82675 430 aaKnown RBP16.28■□□□□ 0.2
LRFN1-201ENST00000248668 XRCC4Q13426 336 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 EFHC1Q5JVL4 640 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 MROH9Q5TGP6 573 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 FAM72AQ5TYM5 149 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 OTUD1Q5VV17 481 aaPredicted RBP16.28■□□□□ 0.2
LRFN1-201ENST00000248668 FAM72DQ6L9T8 149 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 ZNF449Q6P9G9 518 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 DSTYKQ6XUX3 929 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 CDHR3Q6ZTQ4 885 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 FAM72BQ86X60 149 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 TRPV1Q8NER1 839 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 HSFY1Q96LI6 401 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 MECRQ9BV79 373 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 ARHGAP39Q9C0H5 1083 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 CFAP69A5D8W1 941 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 YJEFN3A6XGL0 299 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 A8MUI8 341 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 E7ENQ6 273 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 M0QZ92 97 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 EDF1O60869 148 aaKnown RBP16.28■□□□□ 0.2
LRFN1-201ENST00000248668 POMCP01189 267 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 CSH1P0DML2 217 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 CSH2P0DML3 217 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 GDF6Q6KF10 455 aaPredicted RBP16.28■□□□□ 0.2
LRFN1-201ENST00000248668 CES3Q6UWW8 571 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 ZNF534Q76KX8 674 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 VSIG1Q86XK7 387 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 RNF139Q8WU17 664 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 SPDL1Q96EA4 605 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 AGAP3Q96P47 875 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 TMEM237Q96Q45 408 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 RXFP1Q9HBX9 757 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 FZD10Q9ULW2 581 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 INPP5FQ9Y2H2 1132 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 CCDC195A0A1B0GUA6 201 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 UNCXA6NJT0 531 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 ZWINTO95229 277 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 TARSP26639 723 aaKnown RBP16.27■□□□□ 0.2
LRFN1-201ENST00000248668 RGS2P41220 211 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 DEUP1Q05D60 604 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 SLC25A52Q3SY17 297 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 GSTCDQ8NEC7 633 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 TFB1MQ8WVM0 346 aaKnown RBP16.27■□□□□ 0.2
LRFN1-201ENST00000248668 HTR3CQ8WXA8 447 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 FAM124BQ9H5Z6 455 aaPredicted RBP16.27■□□□□ 0.2
LRFN1-201ENST00000248668 FAM105AQ9NUU6 356 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 WDR27A2RRH5 827 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 C2orf71A6NGG8 1288 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 BGNP21810 368 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 TRIM32Q13049 653 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 ANKRD20A2Q5SQ80 823 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 ANKRD20A1Q5TYW2 823 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 ANKRD20A3Q5VUR7 823 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 RASAL3Q86YV0 1011 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 PCED1BQ96HM7 432 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 PPP1R10Q96QC0 940 aaKnown RBP16.27■□□□□ 0.2
LRFN1-201ENST00000248668 HNRNPABQ99729 332 aaKnown RBP16.27■□□□□ 0.2
LRFN1-201ENST00000248668 TACO1Q9BSH4 297 aaKnown RBP16.27■□□□□ 0.2
LRFN1-201ENST00000248668 ANLNQ9NQW6 1124 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 CHKBQ9Y259 395 aa16.27■□□□□ 0.2
LRFN1-201ENST00000248668 A0A0G2JND7 137 aa16.27■□□□□ 0.19
LRFN1-201ENST00000248668 FAM200BP0CF97 657 aa16.27■□□□□ 0.19
LRFN1-201ENST00000248668 COLGALT1Q8NBJ5 622 aa16.27■□□□□ 0.19
LRFN1-201ENST00000248668 RTP4Q96DX8 246 aa16.27■□□□□ 0.19
LRFN1-201ENST00000248668 SYT15Q9BQS2 421 aa16.27■□□□□ 0.19
LRFN1-201ENST00000248668 KATNAL1Q9BW62 490 aa16.27■□□□□ 0.19
LRFN1-201ENST00000248668 ZNF638Q14966 1978 aaKnown RBP16.26■□□□□ 0.19
LRFN1-201ENST00000248668 E2F8A0AVK6 867 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 SMAPO00193 183 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 USP12O75317 370 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 NCAM1P13591 858 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 MRPS6P82932 125 aaKnown RBP16.26■□□□□ 0.19
LRFN1-201ENST00000248668 XKR4Q5GH76 650 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 RFWD2Q8NHY2 731 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 ZNF483Q8TF39 744 aaPredicted RBP16.26■□□□□ 0.19
LRFN1-201ENST00000248668 QKIQ96PU8 341 aaKnown RBP eCLIP16.26■□□□□ 0.19
LRFN1-201ENST00000248668 IQCGQ9H095 443 aaKnown RBP16.26■□□□□ 0.19
LRFN1-201ENST00000248668 AGO3Q9H9G7 860 aaKnown RBP16.26■□□□□ 0.19
LRFN1-201ENST00000248668 PPCSQ9HAB8 311 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 RNF103O00237 685 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 UPP2O95045 317 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 GNAT1P11488 350 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 WARSP23381 471 aaKnown RBP16.26■□□□□ 0.19
LRFN1-201ENST00000248668 BNIP1Q12981 228 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 GALNTL6Q49A17 601 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 SLC26A11Q86WA9 606 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 TOP6BLQ8N6T0 577 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 ZNF513Q8N8E2 541 aaPredicted RBP16.26■□□□□ 0.19
LRFN1-201ENST00000248668 PRDM12Q9H4Q4 367 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 MANSC1Q9H8J5 431 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 PCMTD2Q9NV79 361 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 STARD13Q9Y3M8 1113 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 APOEP02649 317 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 THP07101 528 aa16.26■□□□□ 0.19
LRFN1-201ENST00000248668 GSTA1P08263 222 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms