RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 MFSD11O43934 449 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 TPSB2P20231 275 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 SSTR1P30872 391 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 TPSAB1Q15661 275 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 VSTM1Q6UX27 236 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 SRRM1Q8IYB3 904 aaKnown RBP24.04■■□□□ 1.44
MSX2-201ENST00000239243 ADAM32Q8TC27 787 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 LRRC39Q96DD0 335 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 TMEM209Q96SK2 561 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 TEX264Q9Y6I9 313 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 PATJQ8NI35 1801 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 APRTP07741 180 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 OR1G1P47890 313 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 SEMA3BQ13214 749 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 DCP1BQ8IZD4 617 aaKnown RBP24.04■■□□□ 1.44
MSX2-201ENST00000239243 WDR83Q9BRX9 315 aaKnown RBP24.04■■□□□ 1.44
MSX2-201ENST00000239243 WDCPQ9H6R7 721 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 KCNK9Q9NPC2 374 aa24.04■■□□□ 1.44
MSX2-201ENST00000239243 NLRC5Q86WI3 1866 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 OAZ2O95190 189 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 ELK3P41970 407 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 GLUD2P49448 558 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 CXCR3P49682 368 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 TPI1P60174 286 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 MICALCLQ6ZW33 695 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 EDEM1Q92611 657 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.03■■□□□ 1.44
MSX2-201ENST00000239243 TMPRSS4Q9NRS4 437 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 CHMP2BQ9UQN3 213 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 A0A0A0MRY4 1105 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 DCLK1O15075 740 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 FDFT1P37268 417 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 CDK7P50613 346 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 PRKD1Q15139 912 aaPredicted RBP24.03■■□□□ 1.44
MSX2-201ENST00000239243 TRABD2AQ86V40 505 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 ABI1Q8IZP0 508 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 FBF1Q8TES7 1133 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 ZNF296Q8WUU4 475 aaPredicted RBP24.03■■□□□ 1.44
MSX2-201ENST00000239243 DYDC1Q8WWB3 177 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 SPATA13Q96N96 652 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 CYTH2Q99418 400 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 FAM107BQ9H098 131 aa24.03■■□□□ 1.44
MSX2-201ENST00000239243 F8W810 466 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 NCAM2O15394 837 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 KRT15P19012 456 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 SARNPP82979 210 aaKnown RBP24.02■■□□□ 1.44
MSX2-201ENST00000239243 SEMA5AQ13591 1074 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 CPLX4Q7Z7G2 160 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 EPAS1Q99814 870 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 PRMT1Q99873 361 aaKnown RBP24.02■■□□□ 1.44
MSX2-201ENST00000239243 ABCC13Q9NSE7 274 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 NKIRAS1Q9NYS0 192 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 GGA2Q9UJY4 613 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 MFHAS1Q9Y4C4 1052 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 DNM1LO00429 736 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 SYN3O14994 580 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 B4GALT3O60512 393 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 CYP2C18P33260 490 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 GRIK1P39086 918 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 CDK16Q00536 496 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 NFE2Q16621 373 aaPredicted RBP24.02■■□□□ 1.44
MSX2-201ENST00000239243 FAXCQ5TGI0 409 aa24.02■■□□□ 1.44
MSX2-201ENST00000239243 OPHN1O60890 802 aa24.01■■□□□ 1.43
MSX2-201ENST00000239243 VEGFBP49765 207 aa24.01■■□□□ 1.43
MSX2-201ENST00000239243 ANKRD20A2Q5SQ80 823 aa24.01■■□□□ 1.43
MSX2-201ENST00000239243 ANKRD20A1Q5TYW2 823 aa24.01■■□□□ 1.43
MSX2-201ENST00000239243 ANKRD20A3Q5VUR7 823 aa24.01■■□□□ 1.43
MSX2-201ENST00000239243 CTU1Q7Z7A3 348 aaKnown RBP24.01■■□□□ 1.43
MSX2-201ENST00000239243 FAM126BQ8IXS8 530 aa24.01■■□□□ 1.43
MSX2-201ENST00000239243 FUBP3Q96I24 572 aaKnown RBP eCLIP24.01■■□□□ 1.43
MSX2-201ENST00000239243 ZCWPW1Q9H0M4 648 aa24.01■■□□□ 1.43
MSX2-201ENST00000239243 XAB2Q9HCS7 855 aaKnown RBP24.01■■□□□ 1.43
MSX2-201ENST00000239243 TMEM51Q9NW97 253 aa24.01■■□□□ 1.43
MSX2-201ENST00000239243 TADA2AO75478 443 aa24■■□□□ 1.43
MSX2-201ENST00000239243 METTL18O95568 372 aa24■■□□□ 1.43
MSX2-201ENST00000239243 VAV1P15498 845 aa24■■□□□ 1.43
MSX2-201ENST00000239243 CREB1P16220 341 aa24■■□□□ 1.43
MSX2-201ENST00000239243 ERCC2P18074 760 aa24■■□□□ 1.43
MSX2-201ENST00000239243 SLC5A3P53794 718 aa24■■□□□ 1.43
MSX2-201ENST00000239243 AP1B1Q10567 949 aa24■■□□□ 1.43
MSX2-201ENST00000239243 ZNF317Q96PQ6 595 aaPredicted RBP24■■□□□ 1.43
MSX2-201ENST00000239243 LGMNQ99538 433 aa24■■□□□ 1.43
MSX2-201ENST00000239243 DHRS4Q9BTZ2 278 aa24■■□□□ 1.43
MSX2-201ENST00000239243 BRD8Q9H0E9 1235 aa24■■□□□ 1.43
MSX2-201ENST00000239243 PCDHB7Q9Y5E2 793 aa24■■□□□ 1.43
MSX2-201ENST00000239243 GSTA2P09210 222 aa24■■□□□ 1.43
MSX2-201ENST00000239243 STX2P32856 288 aa24■■□□□ 1.43
MSX2-201ENST00000239243 MSH2P43246 934 aa24■■□□□ 1.43
MSX2-201ENST00000239243 SLC18A1P54219 525 aa24■■□□□ 1.43
MSX2-201ENST00000239243 YWHAGP61981 247 aaKnown RBP eCLIP24■■□□□ 1.43
MSX2-201ENST00000239243 SLC39A12Q504Y0 691 aa24■■□□□ 1.43
MSX2-201ENST00000239243 PLEKHG4Q58EX7 1191 aa24■■□□□ 1.43
MSX2-201ENST00000239243 ADGRD1Q6QNK2 874 aa24■■□□□ 1.43
MSX2-201ENST00000239243 TAC4Q86UU9 113 aa24■■□□□ 1.43
MSX2-201ENST00000239243 DQX1Q8TE96 717 aaKnown RBP24■■□□□ 1.43
MSX2-201ENST00000239243 LRRN4Q8WUT4 740 aa24■■□□□ 1.43
MSX2-201ENST00000239243 SGSM3Q96HU1 749 aa24■■□□□ 1.43
MSX2-201ENST00000239243 SMC6Q96SB8 1091 aa24■■□□□ 1.43
MSX2-201ENST00000239243 PAFAH2Q99487 392 aa24■■□□□ 1.43
MSX2-201ENST00000239243 TKTL2Q9H0I9 626 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms