RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PRKCBP05771 671 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 SMIM18P0DKX4 95 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 ALOX15P16050 662 aaPredicted RBP15.99■□□□□ 0.15
DDX55-201ENST00000238146 NCF2P19878 526 aaPredicted RBP15.99■□□□□ 0.15
DDX55-201ENST00000238146 TPSB2P20231 275 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 TPSAB1Q15661 275 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 BOLA3Q53S33 107 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 ARMC3Q5W041 872 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 SMYD5Q6GMV2 418 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 OR6B2Q6IFH4 312 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 ARPINQ7Z6K5 226 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 ICA1LQ8NDH6 482 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 PIP4K2CQ8TBX8 421 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 PPP4R1Q8TF05 950 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 TMEM176AQ96HP8 235 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 GCNAQ96QF7 691 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 BTBD7Q9P203 1132 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 INPP5FQ9Y2H2 1132 aa15.99■□□□□ 0.15
DDX55-201ENST00000238146 CAPN8A6NHC0 703 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 CILPO75339 1184 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 MAFO75444 373 aaPredicted RBP15.98■□□□□ 0.15
DDX55-201ENST00000238146 RANBP1P43487 201 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 MTTPP55157 894 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 SH3BGRP55822 239 aaPredicted RBP15.98■□□□□ 0.15
DDX55-201ENST00000238146 R3HDM1Q15032 1099 aaKnown RBP15.98■□□□□ 0.15
DDX55-201ENST00000238146 CCDC14Q49A88 953 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 OGFRL1Q5TC84 451 aaPredicted RBP15.98■□□□□ 0.15
DDX55-201ENST00000238146 FAM183BPQ6ZVS7 135 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 CYS1Q717R9 158 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 DPH6Q7L8W6 267 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 TMC7Q7Z402 723 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 CDR2LQ86X02 465 aaPredicted RBP15.98■□□□□ 0.15
DDX55-201ENST00000238146 HIC2Q96JB3 615 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 NDUFA13Q9P0J0 144 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 PHF24Q9UPV7 400 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 PSME4Q14997 1843 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.98■□□□□ 0.15
DDX55-201ENST00000238146 ATP9BO43861 1147 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 GCATO75600 419 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 GRK2P25098 689 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 FDFT1P37268 417 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 FSTL1Q12841 308 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 SNAPC2Q13487 334 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 TTLL12Q14166 644 aaPredicted RBP15.98■□□□□ 0.15
DDX55-201ENST00000238146 TLR1Q15399 786 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 FAM96AQ9H5X1 160 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 NGRNQ9NPE2 291 aaKnown RBP15.98■□□□□ 0.15
DDX55-201ENST00000238146 XPNPEP3Q9NQH7 507 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 NRBP2Q9NSY0 501 aa15.98■□□□□ 0.15
DDX55-201ENST00000238146 WDR27A2RRH5 827 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 DCXO43602 365 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 ALDH1A2O94788 518 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 PENKP01210 267 aaPredicted RBP15.97■□□□□ 0.15
DDX55-201ENST00000238146 PRKG1Q13976 671 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 C4orf22Q6V702 233 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 PACS1Q6VY07 963 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 C1orf127Q8N9H9 656 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 RNF149Q8NC42 400 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 DGCR14Q96DF8 476 aaKnown RBP15.97■□□□□ 0.15
DDX55-201ENST00000238146 ZBED3Q96IU2 234 aaPredicted RBP15.97■□□□□ 0.15
DDX55-201ENST00000238146 PRICKLE1Q96MT3 831 aaPredicted RBP15.97■□□□□ 0.15
DDX55-201ENST00000238146 SNRNP25Q9BV90 132 aaKnown RBP15.97■□□□□ 0.15
DDX55-201ENST00000238146 DCDC2Q9UHG0 476 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 DTNAQ9Y4J8 743 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 FER1L6Q2WGJ9 1857 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 COX4I1P13073 169 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 ALDH1A3P47895 512 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 NIPAL4Q0D2K0 466 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 MAP7Q14244 749 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 TMEM132BQ14DG7 1078 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.97■□□□□ 0.15
DDX55-201ENST00000238146 STEAP4Q687X5 459 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 CDKL3Q8IVW4 592 aaPredicted RBP15.97■□□□□ 0.15
DDX55-201ENST00000238146 TMEM192Q8IY95 271 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 ATP2A3Q93084 1043 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 MPP4Q96JB8 637 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 HEXIM2Q96MH2 286 aaKnown RBP15.97■□□□□ 0.15
DDX55-201ENST00000238146 TEPSINQ96N21 525 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 IFT122Q9HBG6 1241 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 SSX2IPQ9Y2D8 614 aa15.97■□□□□ 0.15
DDX55-201ENST00000238146 ADCY6O43306 1168 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 ZBTB14O43829 449 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 ASLP04424 464 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 TFAP2AP05549 437 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 PROZP22891 400 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 HARS2P49590 506 aaKnown RBP15.96■□□□□ 0.15
DDX55-201ENST00000238146 ABCE1P61221 599 aaKnown RBP15.96■□□□□ 0.15
DDX55-201ENST00000238146 CRADDP78560 199 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 GBE1Q04446 702 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 DEUP1Q05D60 604 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 LAMTOR4Q0VGL1 99 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 SLC10A2Q12908 348 aaPredicted RBP15.96■□□□□ 0.15
DDX55-201ENST00000238146 ITGA9Q13797 1035 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 PPP6R3Q5H9R7 873 aaPredicted RBP15.96■□□□□ 0.15
DDX55-201ENST00000238146 PPM1JQ5JR12 505 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 MARVELD2Q8N4S9 558 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 JDP2Q8WYK2 163 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 TMEM216Q9P0N5 145 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 COPG2Q9UBF2 871 aa15.96■□□□□ 0.15
DDX55-201ENST00000238146 TMCO1Q9UM00 188 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms