RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ORC1Q13415 861 aa25.75■■□□□ 1.71
RUNDC3A-201ENST00000225441 ATG16L1Q676U5 607 aa25.75■■□□□ 1.71
RUNDC3A-201ENST00000225441 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.75■■□□□ 1.71
RUNDC3A-201ENST00000225441 SKA1Q96BD8 255 aa25.75■■□□□ 1.71
RUNDC3A-201ENST00000225441 C7orf26Q96N11 449 aa25.75■■□□□ 1.71
RUNDC3A-201ENST00000225441 LRRC42Q9Y546 428 aa25.75■■□□□ 1.71
RUNDC3A-201ENST00000225441 GPR182O15218 404 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 PYGBP11216 843 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 CKBP12277 381 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 CYP3A5P20815 502 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 CNTFP26441 200 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 MAGEA3P43357 314 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 ANKRD20A2Q5SQ80 823 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 ANKRD20A1Q5TYW2 823 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 ANKRD20A3Q5VUR7 823 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 C1orf228Q6PIY5 440 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 UNC93AQ86WB7 457 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 PTCD3Q96EY7 689 aaKnown RBP25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 BTBD10Q9BSF8 475 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 AGO3Q9H9G7 860 aaKnown RBP25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 XAB2Q9HCS7 855 aaKnown RBP25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 SNTG2Q9NY99 539 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 HEY2Q9UBP5 337 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 WDR91A4D1P6 747 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 GOLGA8RI6L899 631 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 LPIN1Q14693 890 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 GOLGA7BQ2TAP0 167 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 ZNF449Q6P9G9 518 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 FAM126BQ8IXS8 530 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 RFWD2Q8NHY2 731 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 DNAI2Q9GZS0 605 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 NXF3Q9H4D5 531 aaKnown RBP25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 DCLRE1BQ9H816 532 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 CHST12Q9NRB3 414 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 KCNK4Q9NYG8 393 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 PLLPQ9Y342 182 aa25.74■■□□□ 1.71
RUNDC3A-201ENST00000225441 CBX6O95503 412 aa25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 APOEP02649 317 aa25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 RPSAP08865 295 aaKnown RBP25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 DLDP09622 509 aaKnown RBP25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 NEFHP12036 1026 aa25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 GCKP35557 465 aa25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 MNX1P50219 401 aaPredicted RBP25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 C15orf59Q2T9L4 293 aaPredicted RBP25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 STXBP5Q5T5C0 1151 aa25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 ARHGAP17Q68EM7 881 aa25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 TWF2Q6IBS0 349 aaKnown RBP25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 CAND1Q86VP6 1230 aaKnown RBP25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 TEX9Q8N6V9 391 aa25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 PCDH19Q8TAB3 1148 aa25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 FAM111AQ96PZ2 611 aa25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 KCNK13Q9HB14 408 aa25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 SQORQ9Y6N5 450 aa25.73■■□□□ 1.71
RUNDC3A-201ENST00000225441 TRIM49D1C9J1S8 452 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 I3L4J1 428 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 ZNF189O75820 626 aaPredicted RBP25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 CD52P31358 61 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 SH3PXD2AQ5TCZ1 1133 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 TRAF7Q6Q0C0 670 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 TIFABQ6ZNK6 161 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 FAM172AQ8WUF8 416 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 SLC35F5Q8WV83 523 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 PTPRN2Q92932 1015 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 SRPK1Q96SB4 655 aaKnown RBP25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 HESX1Q9UBX0 185 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 DCTN4Q9UJW0 460 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 PADI3Q9ULW8 664 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 HES2Q9Y543 173 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 BIRC5O15392 142 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 TPBGLP0DKB5 382 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 RBL1P28749 1068 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 SARNPP82979 210 aaKnown RBP25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 DPYSL2Q16555 572 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 VPS52Q8N1B4 723 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 PLCD3Q8N3E9 789 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 LRRC52Q8N7C0 313 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 MIEF2Q96C03 454 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 SNX27Q96L92 541 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 NUDCD1Q96RS6 583 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 KLF6Q99612 283 aaPredicted RBP25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 SNRNP25Q9BV90 132 aaKnown RBP25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 TMEM120AQ9BXJ8 343 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 ADAM33Q9BZ11 813 aa25.72■■□□□ 1.71
RUNDC3A-201ENST00000225441 A0A0G2JND7 137 aa25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 CD4P01730 458 aa25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 EPHB2P29323 1055 aa25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 ZBTB16Q05516 673 aa25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 BZW1Q7L1Q6 419 aaKnown RBP25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 ARHGAP24Q8N264 748 aa25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 TAB3Q8N5C8 712 aaPredicted RBP25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 PPM1NQ8N819 430 aa25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 GSDMBQ8TAX9 411 aa25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 CENPIQ92674 756 aaPredicted RBP25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 CFAP36Q96G28 342 aa25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 NRDE2Q9H7Z3 1164 aa25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 IPPQ9Y573 584 aa25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 DNAH12Q6ZR08 3092 aa25.71■■□□□ 1.71
RUNDC3A-201ENST00000225441 FAM159BA6NKW6 160 aa25.7■■□□□ 1.71
RUNDC3A-201ENST00000225441 HACD1B0YJ81 288 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms