RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 SLC15A5A6NIM6 579 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 WNT10BO00744 389 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 PEX1O43933 1283 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 ABCB1P08183 1280 aaPredicted RBP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 PNMA6AP0CW24 399 aaPredicted RBP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 CHKAP35790 457 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 NFYCQ13952 458 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 CSHL1Q14406 222 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 PKN2Q16513 984 aaKnown RBP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 GLT6D1Q7Z4J2 308 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 CHPFQ8IZ52 775 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 TMEM86AQ8N2M4 240 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 GRIN3AQ8TCU5 1115 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 CLIP3Q96DZ5 547 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 TMEM237Q96Q45 408 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 ASB7Q9H672 318 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 TLE6Q9H808 572 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 LRRC4BQ9NT99 713 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 KLHL3Q9UH77 587 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 POLG2Q9UHN1 485 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 PSME2Q9UL46 239 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 LZTS1Q9Y250 596 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 SHROOM2Q13796 1616 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 USP1O94782 785 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 SLC2A4P14672 509 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 KCNJ1P48048 391 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 SNRPD1P62314 119 aaKnown RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 CYLC2Q14093 348 aaPredicted RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 TFDP3Q5H9I0 405 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 PAGE2BQ5JRK9 111 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 HECTD3Q5T447 861 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 GALNT4Q8N4A0 578 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 DAGLBQ8NCG7 672 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 FAM120BQ96EK7 910 aaKnown RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 PPP1R10Q96QC0 940 aaKnown RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 LRRC1Q9BTT6 524 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 SEPT3Q9UH03 358 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 MOXD2PA6NHM9 499 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 ANKDD1BA6NHY2 528 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 TMEM88BA6NKF7 163 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 SLC37A4O43826 429 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 PRKAR2AP13861 404 aaKnown RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 CYP11B1P15538 503 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 IL2P60568 153 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 STRA8Q7Z7C7 330 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 MRPS26Q9BYN8 205 aaKnown RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 ROPN1BQ9BZX4 212 aaPredicted RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 ROPN1Q9HAT0 212 aaPredicted RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 UBP1Q9NZI7 540 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 MARCH2Q9P0N8 246 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 SGPL1O95470 568 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 PGK1P00558 417 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 COILP38432 576 aaPredicted RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 GPR15P49685 360 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 DYNC1I2Q13409 638 aaKnown RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 NEK10Q6ZWH5 1172 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 PRPF39Q86UA1 669 aaKnown RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 GATAD2AQ86YP4 633 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 NACC2Q96BF6 587 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 GAD1Q99259 594 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 AGPAT5Q9NUQ2 364 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 IL1RAPL1Q9NZN1 696 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 CLK2P49760 499 aaKnown RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 MAD2L1Q13257 205 aaPredicted RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 LRRC36Q1X8D7 754 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 USP41Q3LFD5 358 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 TCEAL5Q5H9L2 206 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 INTS5Q6P9B9 1019 aaKnown RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 OSBPL1AQ9BXW6 950 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 PRRG4Q9BZD6 226 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 GAKO14976 1311 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 MED24O75448 989 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 GCATO75600 419 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 CATP04040 527 aaKnown RBP10.81□□□□□ -0.68
TRPS1-201ENST00000220888 DNTTP04053 509 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 PSMC3P17980 439 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 NTSP30990 170 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 NDST1P52848 882 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 MIIPQ5JXC2 388 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 FBXO38Q6PIJ6 1188 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 ZDHHC17Q8IUH5 632 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 SLC22A9Q8IVM8 553 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 DPY30Q9C005 99 aa10.81□□□□□ -0.68
TRPS1-201ENST00000220888 B2RBV5 119 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 IGF2BP3O00425 579 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRPS1-201ENST00000220888 TPST1O60507 370 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 HIST1H2ABP04908 130 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 CSH1P0DML2 217 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 CSH2P0DML3 217 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 CHN1P15882 459 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 BDNFP23560 247 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 GPR1P46091 355 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 MPP3Q13368 585 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 GJC2Q5T442 439 aaPredicted RBP10.8□□□□□ -0.68
TRPS1-201ENST00000220888 RAET1GQ6H3X3 334 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 HIST3H2AQ7L7L0 130 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 HDDC2Q7Z4H3 204 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 FAM20CQ8IXL6 584 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 HIST1H2ACQ93077 130 aa10.8□□□□□ -0.68
TRPS1-201ENST00000220888 APBA2Q99767 749 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms