RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 RBM15Q96T37 977 aaKnown RBP eCLIP14.05□□□□□ -0.167e-13■■■■■ 35
GABPB1-201ENST00000220429 OLFM1Q99784 485 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 CCDC77Q9BR77 488 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 FAM213AQ9BRX8 229 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 SMG5Q9UPR3 1016 aaKnown RBP14.05□□□□□ -0.16
GABPB1-201ENST00000220429 DNAJC16Q9Y2G8 782 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 PTPN22Q9Y2R2 807 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 ALG6Q9Y672 507 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 SNCAIPQ9Y6H5 919 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 SYNGAP1Q96PV0 1343 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 KRBA1A5PL33 1030 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 ALOX15BO15296 676 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 GZMAP12544 262 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 ZNF23P17027 643 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 HSPA6P17066 643 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 BDNFP23560 247 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 PIK3CAP42336 1068 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 ADAM17P78536 824 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 CREB5Q02930 508 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 VGLL4Q14135 290 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 SPCS2Q15005 226 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 STXBP2Q15833 593 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 CYP2U1Q7Z449 544 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 TRABD2AQ86V40 505 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 TRIML2Q8N7C3 387 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 GABPB2Q8TAK5 448 aaPredicted RBP14.05□□□□□ -0.16
GABPB1-201ENST00000220429 GSDMBQ8TAX9 411 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 ALG3Q92685 438 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 HPS1Q92902 700 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 HAUS8Q9BT25 410 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 XAB2Q9HCS7 855 aaKnown RBP14.05□□□□□ -0.16
GABPB1-201ENST00000220429 ARMCX1Q9P291 453 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 GTF3C4Q9UKN8 822 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 MAFBQ9Y5Q3 323 aaPredicted RBP14.05□□□□□ -0.16
GABPB1-201ENST00000220429 CDK2AP1O14519 115 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 FCHO1O14526 889 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 CASQ2O14958 399 aaPredicted RBP14.04□□□□□ -0.16
GABPB1-201ENST00000220429 CYP11B1P15538 503 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 CA4P22748 312 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 ICAM3P32942 547 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 CHKAP35790 457 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 HNRNPFP52597 415 aaKnown RBP14.04□□□□□ -0.16
GABPB1-201ENST00000220429 NR1H3Q13133 447 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 TWF2Q6IBS0 349 aaKnown RBP14.04□□□□□ -0.16
GABPB1-201ENST00000220429 CCDC105Q8IYK2 499 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 GPC2Q8N158 579 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 ATP6V0D2Q8N8Y2 350 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 CHST13Q8NET6 341 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 DNERQ8NFT8 737 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 EXD1Q8NHP7 514 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 DHX38Q92620 1227 aaKnown RBP14.04□□□□□ -0.16
GABPB1-201ENST00000220429 TMEM120AQ9BXJ8 343 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 RAB26Q9ULW5 256 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 INPP5FQ9Y2H2 1132 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 A0A0G2JMZ2 1700 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 SBF1O95248 1867 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 ATG7O95352 703 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 CRYZL1O95825 349 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 DDX5P17844 614 aaKnown RBP14.04□□□□□ -0.16
GABPB1-201ENST00000220429 ZNF200P98182 395 aaPredicted RBP14.04□□□□□ -0.16
GABPB1-201ENST00000220429 EFHC1Q5JVL4 640 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 FAM91A1Q658Y4 838 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 C11orf63Q6NUN7 778 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 SLC38A6Q8IZM9 456 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 GIMAP1Q8WWP7 306 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 TMEM143Q96AN5 459 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 TAMM41Q96BW9 452 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 THAP11Q96EK4 314 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 PI4K2AQ9BTU6 479 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 KLHL25Q9H0H3 589 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 TRABDQ9H4I3 376 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 ZNF302Q9NR11 478 aa14.04□□□□□ -0.16
GABPB1-201ENST00000220429 CRTAMO95727 393 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 ENO1P06733 434 aaKnown RBP14.03□□□□□ -0.16
GABPB1-201ENST00000220429 ABCB1P08183 1280 aaPredicted RBP14.03□□□□□ -0.16
GABPB1-201ENST00000220429 P4HA1P13674 534 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 CTNNA2P26232 953 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 YWHAGP61981 247 aaKnown RBP eCLIP14.03□□□□□ -0.16
GABPB1-201ENST00000220429 GK3PQ14409 553 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 C4orf22Q6V702 233 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 LBX2Q6XYB7 198 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 USP37Q86T82 979 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 LSMEM2Q8N112 164 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 ZNF516Q92618 1163 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 KRT35Q92764 455 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 DCUN1D1Q96GG9 259 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 DCUN1D5Q9BTE7 237 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 B3GNT4Q9C0J1 378 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 PCDHGA11Q9Y5H2 935 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 SLC30A1Q9Y6M5 507 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 PAPPA2Q9BXP8 1791 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 WDR91A4D1P6 747 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 TRPA1O75762 1119 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 ADSLP30566 484 aaPredicted RBP14.03□□□□□ -0.16
GABPB1-201ENST00000220429 WNT7BP56706 349 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 STAT4Q14765 748 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 PCSK7Q16549 785 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 C15orf39Q6ZRI6 1047 aa14.03□□□□□ -0.16
GABPB1-201ENST00000220429 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
GABPB1-201ENST00000220429 DDX1Q92499 740 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms