RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 MCUQ8NE86 351 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 IPMKQ8NFU5 416 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 WNT8BQ93098 351 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 HSD3B7Q9H2F3 369 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 ASAH2Q9NR71 780 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 ABCC13Q9NSE7 274 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 VPS28Q9UK41 221 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 STXBP5LQ9Y2K9 1186 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 SIGLEC16A6NMB1 481 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 PPEF2O14830 753 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 FAM107AO95990 144 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 H2AFXP16104 143 aaPredicted RBP9.7□□□□□ -0.86
CCDC113-201ENST00000219299 COL24A1Q17RW2 1714 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 HECTD3Q5T447 861 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 JAMLQ86YT9 394 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 EXD1Q8NHP7 514 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 TMEM40Q8WWA1 233 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 MAGEB5Q9BZ81 275 aa9.7□□□□□ -0.86
CCDC113-201ENST00000219299 TUBP50607 506 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 KPNA1P52294 538 aaPredicted RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 HIF1AQ16665 826 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 CNKSR3Q6P9H4 555 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 KCNT2Q6UVM3 1135 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 PRSS55Q6UWB4 352 aaPredicted RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 TAS1R3Q7RTX0 852 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 CATSPER1Q8NEC5 780 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 VPS39Q96JC1 886 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 C9orf72Q96LT7 481 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 DPEP3Q9H4B8 488 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 VANGL2Q9ULK5 521 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 COQ4Q9Y3A0 265 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 USP15Q9Y4E8 981 aaPredicted RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 hCG_2014768A0A024R1R8 64 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 IGKV6-21A0A0C4DH24 114 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 CBX4O00257 560 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 RAD51CO43502 376 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 JCHAINP01591 159 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 HNRNPH3P31942 346 aaKnown RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 PTPN20Q4JDL3 420 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 DAB2IPQ5VWQ8 1189 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 MFSD7Q6UXD7 560 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 SPOCD1Q6ZMY3 1216 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 ANKMY2Q8IV38 441 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 SH2D3CQ8N5H7 860 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 TFB1MQ8WVM0 346 aaKnown RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 SGSM3Q96HU1 749 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 CEP19Q96LK0 163 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 CPXM1Q96SM3 734 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 PCDHB18PQ96TA0 734 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 OLA1Q9NTK5 396 aaKnown RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 MYH8P13535 1937 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 CCDC22O60826 627 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 KRT38O76015 456 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 AMPD1P23109 780 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 PSMD7P51665 324 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 C11orf63Q6NUN7 778 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 LCLAT1Q6UWP7 414 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 MYLK4Q86YV6 388 aaPredicted RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 MYCBPAPQ8TBZ2 947 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 RSPH1Q8WYR4 309 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 RAPGEF5Q92565 580 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 CDK5RAP1Q96SZ6 601 aaKnown RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 SATB2Q9UPW6 733 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 VNN1O95497 513 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 RHOCP08134 193 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 TKTP29401 623 aaKnown RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 TAF10Q12962 218 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 MEI1Q5TIA1 1274 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 TMEM154Q6P9G4 183 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 SLC39A5Q6ZMH5 540 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 SLC25A41Q8N5S1 370 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 PLEKHO2Q8TD55 490 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 TFAP2BQ92481 460 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 NDRG1Q92597 394 aaKnown RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 KRT35Q92764 455 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 TMA16Q96EY4 203 aaKnown RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 XPO6Q96QU8 1125 aaKnown RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 TBCBQ99426 244 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 PAK5Q9P286 719 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 INSL6Q9Y581 213 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 MYH4Q9Y623 1939 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 RCCD1A6NED2 376 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 TLR5O60602 858 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 HSPA4LO95757 839 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 PYGMP11217 842 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 RARGP13631 454 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 LRRC14Q15048 493 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 ATP13A4Q4VNC1 1196 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 TRMT10CQ7L0Y3 403 aaKnown RBP9.69□□□□□ -0.86
CCDC113-201ENST00000219299 DCLK2Q8N568 766 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 PCED1BQ96HM7 432 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 TLR10Q9BXR5 811 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 MLXIPLQ9NP71 852 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 CNGB3Q9NQW8 809 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 SENP1Q9P0U3 644 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 DCTN4Q9UJW0 460 aa9.69□□□□□ -0.86
CCDC113-201ENST00000219299 COL4A5P29400 1685 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 CCT8L1PA6NM43 557 aa9.68□□□□□ -0.86
CCDC113-201ENST00000219299 NVLO15381 856 aaKnown RBP9.68□□□□□ -0.86
CCDC113-201ENST00000219299 MTSS1O43312 755 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms