RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Dennd1aQ8K382 1016 aa23.68■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Igsf8Q8R366 611 aa23.68■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Kif12Q9D2Z8 642 aa23.68■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Strn3Q9ERG2 796 aa23.68■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Tacc3Q9JJ11 631 aa23.68■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Bace2Q9JL18 514 aa23.68■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Igkv5-43A0A0B4J1J2 115 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Fam171a1A2ATK9 892 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Zfp715G3X9T1 886 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 NoctO35710 429 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Soat2O88908 525 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Adad1Q5SUE7 619 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Dmc1Q61880 340 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Nrg1Q6DR99 700 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Pdcd2lQ8C5N5 364 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Znf622Q91VY9 476 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Pcdha3Q91Y16 942 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Pdxdc1Q99K01 787 aaKnown RBP23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Pex6Q99LC9 981 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Satl1Q9D5N8 744 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 DmgdhQ9DBT9 869 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 NckipsdQ9ESJ4 714 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 CenpkQ9ESN5 271 aa23.67■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Pcdh7A0A0A6YY83 1255 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 AspgA0JNU3 564 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 5830411N06RikB3F5L4 1112 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Adgrf2E9Q4J9 644 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Adam15O88839 864 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Atxn1lP0C7T6 687 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 March9Q3TZ87 348 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Ndrg1Q62433 394 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Mef2dQ63943 514 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Nlrp14Q6B966 993 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Mon1aQ6PDG8 556 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Iars2Q8BIJ6 1012 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Pcdhb17Q91VD8 799 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Pcdhb6Q91XZ4 772 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Gbf1Q6DFZ1 1861 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Tbc1d16A2ABG4 766 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Rabgap1lA6H6A9 815 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Ldlrad1D3YYZ1 218 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Rasal2E9PW37 1286 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Zc3h12bG3X9I7 835 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Ppargc1aO70343 797 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Fgf18O89101 207 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 P01631 113 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Hmga1P17095 107 aaKnown RBP23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Msh2P43247 935 aaKnown RBP23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 CkbQ04447 381 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Retreg2Q6NS82 541 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Cep104Q80V31 926 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Armc12Q80X86 340 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Mfsd14bQ8CIA9 507 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Mtss1Q8R1S4 759 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Slf1Q8R3P9 1054 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Pde2aQ922S4 916 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Xpo6Q924Z6 1125 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Rfc5Q9D0F6 339 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Q9D454 513 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 PgcQ9D7R7 392 aa23.66■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Tubb1A2AQ07 451 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Ces1bD3Z5G7 567 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Vti1aO89116 217 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 HelqQ2VPA6 1069 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Slc38a5Q3U1J0 479 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Ccdc61Q3UJV1 511 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Inpp4bQ6P1Y8 924 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Xlr3bQ6P205 226 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Tas2r115Q7M719 310 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Vmn2r43Q80Z08 845 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Ifi205aQ8CGE8 404 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 QpctQ9CYK2 362 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Mgrn1Q9D074 532 aa23.65■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Zfp850J3QPC5 689 aa23.64■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Akap1O08715 857 aaKnown RBP23.64■■□□□ 1.38
Upf3a-201ENSMUST00000043767 AfpP02772 605 aa23.64■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Fam207aP58468 219 aaKnown RBP23.64■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Kctd16Q5DTY9 427 aa23.64■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Msi1Q61474 362 aaKnown RBP23.64■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Defb34Q7TNV8 81 aa23.64■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Gcfc2Q8BKT3 769 aa23.64■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Serpina1fQ9DCQ7 411 aa23.64■■□□□ 1.38
Upf3a-201ENSMUST00000043767 Atp8b4A2ANX3 1194 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Speer2E9Q9U2 264 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Gm3460E9QAI8 215 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Grip2G3XA20 1042 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 NrlP54846 237 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Neurog2P70447 263 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 FaxcQ3UMF9 409 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ubn1Q4G0F8 1135 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 AcdQ5EE38 416 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Gm4952Q5FW57 296 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 SgczQ8BX51 311 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Traf3ip2Q8N7N6 555 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Mrpl9Q99N94 265 aaKnown RBP23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Isl2Q9CXV0 359 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ddx21Q9JIK5 851 aaKnown RBP23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 NagaQ9QWR8 415 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Tubd1Q9R1K7 455 aa23.64■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Proca1B0QZF7 307 aa23.63■■□□□ 1.37
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms