RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Itfg1Q99KW9 610 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Spesp1Q9D5A0 399 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tmem115Q9WUH1 350 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pramef17A2ASJ1 475 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gm8298J3QPI0 401 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Naa20P61600 178 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fam83fQ3UKU4 495 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 XpaQ64267 272 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Podnl1Q6P3Y9 559 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 IfneQ80ZF2 192 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Arhgap12Q8C0D4 838 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Atpaf2Q91YY4 289 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Atp6v1g1Q9CR51 118 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slc12a4Q9JIS8 1085 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gyg1Q9R062 333 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ces1bD3Z5G7 567 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Il12bP43432 335 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mageb5Q14AN0 366 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Bnip1Q6QD59 228 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Epb41l5Q8BGS1 731 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 KyQ8C8H8 661 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Olfr330Q8VGD9 315 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Q9CQF4 240 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Dcaf6Q9DC22 876 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slit1Q80TR4 1531 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 DgkdE9PUQ8 1220 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gm3893E9Q1I1 302 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Rpl26P61255 145 aaKnown RBP10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Aak1Q3UHJ0 959 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cyp2c29Q64458 490 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ephx4Q6IE26 359 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Myl12aQ6ZWQ9 172 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Olfr670Q7TRP3 312 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 EtnpplQ8BWU8 499 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slc8a2Q8K596 921 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fam45aQ9D8N2 357 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nrf1Q9WU00 503 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ccdc163A2AGD7 326 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 JhyE9Q793 770 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ttc9Q3V038 219 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 GpamQ61586 827 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 RfflQ6ZQM0 377 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Q8BGN9 141 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Exd1Q8CDF7 570 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 HyiQ8R1F5 277 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Bap1Q99PU7 728 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tex12Q9CR81 123 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tlr9Q9EQU3 1032 aa10.39□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Srsf11E9Q6E5 511 aaKnown RBP10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 HmbsP22907 361 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gnl1P36916 607 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Psme3P61290 254 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Klhl17Q6TDP3 640 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tmc3Q7TQ69 1130 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pacs1Q8K212 961 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nol6Q8R5K4 1152 aaKnown RBP10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Wdr98Q8VC42 657 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ppp1r16bQ8VHQ3 568 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Prkag2Q91WG5 566 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Hdhd5Q91WM2 419 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Q9CPS8 106 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Arl8bQ9CQW2 186 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Krt81Q9ERE2 481 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 M1apQ9Z0E1 529 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gm5114W4VSN8 858 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cep170bQ80U49 1574 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Znf804aA2AKY4 1200 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Erich1E9PY43 332 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Hmgb4Q6P8W9 181 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Zdhhc17Q80TN5 632 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 RadxQ8C779 850 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 OlahQ8R197 265 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Lrrc34Q9DAM1 415 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pkd2l1A2A259 760 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ssxb9A2BI93 185 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Wdr72D3YYM4 1114 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Capn6O35646 641 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Avpr1aQ62463 423 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Sgo2Q7TSY8 1164 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ireb2Q811J3 963 aaKnown RBP10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Wrap53Q8VC51 532 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Far1Q922J9 515 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gm45208A0A140LJ36 292 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gm8113E0CXS8 587 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gm5160F8VPN3 147 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slc16a8O35308 492 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Atp11bQ6DFW5 1175 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Uba3Q8C878 462 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 SntnQ8C9X1 147 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ago4Q8CJF8 861 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Vmn1r214Q8R279 367 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Lman1lQ8VCD3 505 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 PmpcbQ9CXT8 489 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gm28897A0A087WP44 222 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nlrp1bA1Z198 1177 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ntrk1Q3UFB7 799 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 McuQ3UMR5 350 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gpr151Q7TSN6 422 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Trnau1apQ80VC6 287 aaKnown RBP10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ppm1nQ8BGL1 404 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms