RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 TPGS1Q6ZTW0 290 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 TRMT11Q7Z4G4 463 aaKnown RBP10.56□□□□□ -0.72
PHGDH-222ENST00000641587 ZC3H3Q8IXZ2 948 aaKnown RBP10.56□□□□□ -0.72
PHGDH-222ENST00000641587 PDZD8Q8NEN9 1154 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 ZMIZ2Q8NF64 920 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 PLEKHO2Q8TD55 490 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 OTUB2Q96DC9 234 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 TRIM5Q9C035 493 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 HSD3B7Q9H2F3 369 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 KRT82Q9NSB4 513 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 DNAAF2Q9NVR5 837 aaKnown RBP10.56□□□□□ -0.72
PHGDH-222ENST00000641587 TAB2Q9NYJ8 693 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 GPSM3Q9Y4H4 160 aa10.56□□□□□ -0.72
PHGDH-222ENST00000641587 MDM4O15151 490 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 CBFA2T2O43439 604 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 TLR5O60602 858 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 AP1G2O75843 785 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 CLSTN1O94985 981 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 TPM3P06753 285 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 ZDHHC11BP0C7U3 371 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 TYRP14679 529 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 COPB1P53618 953 aaKnown RBP10.55□□□□□ -0.72
PHGDH-222ENST00000641587 GRIK2Q13002 908 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 PSMD6Q15008 389 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 KRT31Q15323 416 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 TRIP6Q15654 476 aaKnown RBP10.55□□□□□ -0.72
PHGDH-222ENST00000641587 ZNF423Q2M1K9 1284 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 COL28A1Q2UY09 1125 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 FILIP1LQ4L180 1135 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 DCAF17Q5H9S7 520 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-222ENST00000641587 SNX30Q5VWJ9 437 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 KIAA1324Q6UXG2 1013 aaKnown RBP10.55□□□□□ -0.72
PHGDH-222ENST00000641587 GPRIN1Q7Z2K8 1008 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 MARCH9Q86YJ5 346 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 SLC9A9Q8IVB4 645 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 NAXDQ8IW45 347 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 FUKQ8N0W3 1084 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 MDM1Q8TC05 714 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 OVCA2Q8WZ82 227 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 MRGPRX1Q96LB2 322 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 SMOQ99835 787 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 GABRG3Q99928 467 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 BBS2Q9BXC9 721 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 NACA2Q9H009 215 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 IL21RQ9HBE5 538 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 METTL14Q9HCE5 456 aaKnown RBP10.55□□□□□ -0.72
PHGDH-222ENST00000641587 KIAA1586Q9HCI6 787 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 DMAP1Q9NPF5 467 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-222ENST00000641587 DMAC2Q9NW81 257 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 OSER1Q9NX31 292 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 PLK2Q9NYY3 685 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 IL37Q9NZH6 218 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 IFNKQ9P0W0 207 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 HMGXB4Q9UGU5 601 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 ARMCX3Q9UH62 379 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-222ENST00000641587 NUDT5Q9UKK9 219 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 STARD13Q9Y3M8 1113 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 APC2O95996 2303 aa10.55□□□□□ -0.72
PHGDH-222ENST00000641587 FAM92AA1XBS5 289 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 CACNG3O60359 315 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 NDUFS2O75306 463 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 ZNF217O75362 1048 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 SYPP08247 313 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 TUBP50607 506 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 UBASH3AP57075 661 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 ACACAQ13085 2346 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 TRPC3Q13507 836 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 MAN2A1Q16706 1144 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 ZNF699Q32M78 642 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 SOWAHCQ53LP3 525 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-222ENST00000641587 RABEPKQ7Z6M1 372 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 ACOT1Q86TX2 421 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 SLCO6A1Q86UG4 719 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 CACUL1Q86Y37 369 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 IRF2BP1Q8IU81 584 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 ZCCHC9Q8N567 271 aaKnown RBP10.54□□□□□ -0.72
PHGDH-222ENST00000641587 KCNV2Q8TDN2 545 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 ADAMTS14Q8WXS8 1223 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 JAKMIP2Q96AA8 810 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 SMARCD1Q96GM5 515 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 ZNF419Q96HQ0 510 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-222ENST00000641587 TUBGCP2Q9BSJ2 902 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 KLF16Q9BXK1 252 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-222ENST00000641587 VPS16Q9H269 839 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 MMRN2Q9H8L6 949 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 FAM49BQ9NUQ9 324 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 LIMA1Q9UHB6 759 aaKnown RBP10.54□□□□□ -0.72
PHGDH-222ENST00000641587 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.54□□□□□ -0.72
PHGDH-222ENST00000641587 NUMA1Q14980 2115 aa10.54□□□□□ -0.72
PHGDH-222ENST00000641587 CYP26A1O43174 497 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 CBFA2T3O75081 653 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 PHACTR2O75167 634 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 ADCY5O95622 1261 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 STAU1O95793 577 aaKnown RBP10.53□□□□□ -0.72
PHGDH-222ENST00000641587 RDXP35241 583 aaKnown RBP10.53□□□□□ -0.72
PHGDH-222ENST00000641587 DGKGP49619 791 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 MAP3K7CLP57077 242 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 BNC1Q01954 994 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 BIRC3Q13489 604 aa10.53□□□□□ -0.72
PHGDH-222ENST00000641587 FUT11Q495W5 492 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms