RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ACADSBP45954 432 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 MAP3K7CLP57077 242 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 WDR4P57081 412 aaKnown RBP15.65■□□□□ 0.1
TRIM3-215ENST00000639856 IL9RQ01113 521 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 SF3A3Q12874 501 aaKnown RBP eCLIP15.65■□□□□ 0.1
TRIM3-215ENST00000639856 KLHL38Q2WGJ6 581 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 GLB1LQ6UWU2 654 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 HSFY1Q96LI6 401 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 SMG5Q9UPR3 1016 aaKnown RBP15.65■□□□□ 0.1
TRIM3-215ENST00000639856 USP15Q9Y4E8 981 aaPredicted RBP15.65■□□□□ 0.1
TRIM3-215ENST00000639856 SCN5AQ14524 2016 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 BCLAF3A2AJT9 711 aaKnown RBP15.64■□□□□ 0.09
TRIM3-215ENST00000639856 INPPL1O15357 1258 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 PQBP1O60828 265 aaKnown RBP15.64■□□□□ 0.09
TRIM3-215ENST00000639856 SPAG7O75391 227 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 ASMTLO95671 621 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 ODC1P11926 461 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 ATP2A2P16615 1042 aaKnown RBP15.64■□□□□ 0.09
TRIM3-215ENST00000639856 NDUFV1P49821 464 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 ATXN1P54253 815 aaKnown RBP15.64■□□□□ 0.09
TRIM3-215ENST00000639856 DPYSL2Q16555 572 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 PPP6R3Q5H9R7 873 aaPredicted RBP15.64■□□□□ 0.09
TRIM3-215ENST00000639856 ADGRD1Q6QNK2 874 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 FAM35AQ86V20 835 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 CNPY4Q8N129 248 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 DENND1AQ8TEH3 1009 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 FBF1Q8TES7 1133 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 MRRFQ96E11 262 aaKnown RBP15.64■□□□□ 0.09
TRIM3-215ENST00000639856 KCNK16Q96T55 309 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 DHRS4Q9BTZ2 278 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 KIF9Q9HAQ2 790 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.64■□□□□ 0.09
TRIM3-215ENST00000639856 FAM200BP0CF97 657 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 RBL1P28749 1068 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 L1CAMP32004 1257 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 CBLBQ13191 982 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 MTM1Q13496 603 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 TCTN1Q2MV58 587 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 TRPM8Q7Z2W7 1104 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 RSPH1Q8WYR4 309 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 TMEM209Q96SK2 561 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 SMOQ99835 787 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 RNF208Q9H0X6 261 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 NRDE2Q9H7Z3 1164 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 RAB6BQ9NRW1 208 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 CDH9Q9ULB4 789 aa15.64■□□□□ 0.09
TRIM3-215ENST00000639856 A0A1W2PPM1 405 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 M0QZQ0 153 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 CAPN15O75808 1086 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 AP1G2O75843 785 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 SUN1O94901 812 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 EOMESO95936 686 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 ZBED1O96006 694 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 CCL5P13501 91 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 TAC1P20366 129 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 CYP2F1P24903 491 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 SCTRP47872 440 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 ATN1P54259 1190 aaPredicted RBP15.63■□□□□ 0.09
TRIM3-215ENST00000639856 SLC8A3P57103 927 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 FAM189BP81408 668 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 EFTUD2Q15029 972 aaKnown RBP eCLIP15.63■□□□□ 0.09
TRIM3-215ENST00000639856 FBXW10Q5XX13 1052 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 GPRIN1Q7Z2K8 1008 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 C4orf33Q8N1A6 199 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 ZMIZ2Q8NF64 920 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 DBF4BQ8NFT6 615 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 OR10T2Q8NGX3 314 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 PAFAH2Q99487 392 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 DHX35Q9H5Z1 703 aaKnown RBP15.63■□□□□ 0.09
TRIM3-215ENST00000639856 CHMP2BQ9UQN3 213 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 TEX264Q9Y6I9 313 aa15.63■□□□□ 0.09
TRIM3-215ENST00000639856 TYROBPO43914 113 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 FOXN2P32314 431 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 ELK3P41970 407 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 SPARCL1Q14515 664 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 ZKSCAN8Q15776 578 aaPredicted RBP15.62■□□□□ 0.09
TRIM3-215ENST00000639856 NOMO2Q5JPE7 1267 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 CTU1Q7Z7A3 348 aaKnown RBP15.62■□□□□ 0.09
TRIM3-215ENST00000639856 MYLPFQ96A32 169 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 FAM149B1Q96BN6 582 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 UROC1Q96N76 676 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 FRMD8Q9BZ67 464 aaPredicted RBP15.62■□□□□ 0.09
TRIM3-215ENST00000639856 SSU72Q9NP77 194 aaKnown RBP15.62■□□□□ 0.09
TRIM3-215ENST00000639856 TBC1D13Q9NVG8 400 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 TMLHEQ9NVH6 421 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 DNAJB4Q9UDY4 337 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 AP4E1Q9UPM8 1137 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 MAP3K6O95382 1288 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 CYP11A1P05108 521 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 ZFXP17010 805 aaPredicted RBP15.62■□□□□ 0.09
TRIM3-215ENST00000639856 CA4P22748 312 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 PCSK1P29120 753 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 TKTL1P51854 596 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 DSC1Q08554 894 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 EFHC1Q5JVL4 640 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 DCLRE1AQ6PJP8 1040 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 STRADAQ7RTN6 431 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 SPATA21Q7Z572 469 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 IGDCC3Q8IVU1 814 aa15.62■□□□□ 0.09
TRIM3-215ENST00000639856 KCTD13Q8WZ19 329 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms