RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	ORAI3	Q9BRQ5	295 aa		12.37	□□□□□ -0.43
PAX6-238	ENST00000638755	B3GNT5	Q9BYG0	378 aa		12.37	□□□□□ -0.43
PAX6-238	ENST00000638755	DPH1	Q9BZG8	443 aa		12.37	□□□□□ -0.43
PAX6-238	ENST00000638755	AASDHPPT	Q9NRN7	309 aa		12.37	□□□□□ -0.43
PAX6-238	ENST00000638755	FBXO10	Q9UK96	956 aa		12.37	□□□□□ -0.43
PAX6-238	ENST00000638755	SLC27A6	Q9Y2P4	619 aa		12.37	□□□□□ -0.43
PAX6-238	ENST00000638755	NME7	Q9Y5B8	376 aa		12.37	□□□□□ -0.43
PAX6-238	ENST00000638755	WNT1	P04628	370 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	EPHA8	P29322	1005 aa	Predicted RBP	12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	PRPH	P41219	470 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	ARRB1	P49407	418 aa	Predicted RBP	12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	SLC5A3	P53794	718 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	ARID5A	Q03989	594 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	TMEM119	Q4V9L6	283 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	LSMEM2	Q8N112	164 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	KCTD17	Q8N5Z5	321 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	ZNF366	Q8N895	744 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	EXD3	Q8N9H8	876 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	SKA1	Q96BD8	255 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	VCPIP1	Q96JH7	1222 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	ELOVL2	Q9NXB9	296 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755	PLXNA2	O75051	1894 aa		12.36	□□□□□ -0.43
PAX6-238	ENST00000638755		K7ENP7	123 aa		12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	YKT6	O15498	198 aa		12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	EPB41L2	O43491	1005 aa	Known RBP	12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	USP12	O75317	370 aa		12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	DNTT	P04053	509 aa		12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	IGHV4-34	P06331	123 aa		12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	ZDHHC11B	P0C7U3	371 aa		12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	ERVPABLB-1	P60509	514 aa		12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	KIAA0895L	Q68EN5	471 aa		12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	INO80C	Q6PI98	192 aa	Predicted RBP	12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	ANKS1B	Q7Z6G8	1248 aa		12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	ANKRD36BP1	Q96IX9	119 aa		12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	MED10	Q9BTT4	135 aa		12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	GDF3	Q9NR23	364 aa		12.35	□□□□□ -0.43
PAX6-238	ENST00000638755	ARID1B	Q8NFD5	2236 aa	Predicted RBP	12.35	□□□□□ -0.43
PAX6-238	ENST00000638755		A0A1W2PPC4	97 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	VWA3A	A6NCI4	1184 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	MDM4	O15151	490 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	DDIT3	P35638	169 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	ATP5C1	P36542	298 aa	Known RBP	12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	E2F1	Q01094	437 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	KCNA1	Q09470	495 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	CAMK2G	Q13555	558 aa	Predicted RBP	12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	UBAP2L	Q14157	1087 aa	Known RBP	12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	MCM6	Q14566	821 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	FNDC3B	Q53EP0	1204 aa	Known RBP	12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	C4orf17	Q53FE4	359 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	CCDC81	Q6ZN84	652 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	CCDC83	Q8IWF9	413 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	OR5B17	Q8NGF7	314 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	GANC	Q8TET4	914 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	PIWIL1	Q96J94	861 aa	Known RBP	12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	POLR1B	Q9H9Y6	1135 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	SGK2	Q9HBY8	427 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	THSD1	Q9NS62	852 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	WDR70	Q9NW82	654 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	NUDT5	Q9UKK9	219 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	PAXBP1	Q9Y5B6	917 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755	CREBBP	Q92793	2442 aa		12.34	□□□□□ -0.43
PAX6-238	ENST00000638755		A8MXQ7	604 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	WNT9A	O14904	365 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	DXO	O77932	396 aa	Known RBP	12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	PENK	P01210	267 aa	Predicted RBP	12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	TNNC2	P02585	160 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	ACP1	P24666	158 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	CD38	P28907	300 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	LSS	P48449	732 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	RPS14	P62263	151 aa	Known RBP	12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	GRIN1	Q05586	938 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	ST3GAL1	Q11201	340 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	E2F5	Q15329	346 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	TTC31	Q49AM3	519 aa	Predicted RBP	12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	SFMBT2	Q5VUG0	894 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	FYB2	Q5VWT5	728 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	TMEM215	Q68D42	235 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755		Q6ZNB5	142 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	ZNF720	Q7Z2F6	126 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	B3GALNT2	Q8NCR0	500 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	FBXO18	Q8NFZ0	1043 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	GZF1	Q9H116	711 aa	Predicted RBP	12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	ST6GALNAC4	Q9H4F1	302 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	PCIF1	Q9H4Z3	704 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	EBF2	Q9HAK2	575 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	ASCL3	Q9NQ33	180 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	TLR8	Q9NR97	1041 aa	Known RBP	12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	INTS13	Q9NVM9	706 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	IL37	Q9NZH6	218 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	CLEC4E	Q9ULY5	219 aa		12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	TLN1	Q9Y490	2541 aa	Known RBP	12.33	□□□□□ -0.44
PAX6-238	ENST00000638755	SUV39H1	O43463	412 aa		12.32	□□□□□ -0.44
PAX6-238	ENST00000638755	PRPF6	O94906	941 aa	Known RBP	12.32	□□□□□ -0.44
PAX6-238	ENST00000638755	LDHA	P00338	332 aa	Known RBP	12.32	□□□□□ -0.44
PAX6-238	ENST00000638755	AFP	P02771	609 aa	Known RBP	12.32	□□□□□ -0.44
PAX6-238	ENST00000638755	DAB2	P98082	770 aa		12.32	□□□□□ -0.44
PAX6-238	ENST00000638755	EIF4H	Q15056	248 aa	Known RBP	12.32	□□□□□ -0.44
PAX6-238	ENST00000638755	PROX2	Q3B8N5	592 aa		12.32	□□□□□ -0.44
PAX6-238	ENST00000638755	ZSCAN23	Q3MJ62	389 aa		12.32	□□□□□ -0.44
PAX6-238	ENST00000638755	FAM35A	Q86V20	835 aa		12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms