RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 TLR6Q9Y2C9 796 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 CCP110O43303 1012 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 IPO7O95373 1038 aaKnown RBP20.21■□□□□ 0.83
HLA-A-209ENST00000638375 KLKB1P03952 638 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 PSMC3P17980 439 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 ATXN1P54253 815 aaKnown RBP20.21■□□□□ 0.83
HLA-A-209ENST00000638375 RING1Q06587 406 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 NME3Q13232 169 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 CDO1Q16878 200 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 Q6ZNB5 142 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 SLC44A3Q8N4M1 653 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 ZNF564Q8TBZ8 553 aaPredicted RBP20.21■□□□□ 0.83
HLA-A-209ENST00000638375 FNIP1Q8TF40 1166 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 DEPDC1BQ8WUY9 529 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 CENPIQ92674 756 aaPredicted RBP20.21■□□□□ 0.83
HLA-A-209ENST00000638375 ASIC4Q96FT7 647 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 PIGVQ9NUD9 493 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 CTTNBP2NLQ9P2B4 639 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 SH3BP1Q9Y3L3 701 aa20.21■□□□□ 0.83
HLA-A-209ENST00000638375 E2F8A0AVK6 867 aa20.2■□□□□ 0.82
HLA-A-209ENST00000638375 ENDOD1O94919 500 aa20.2■□□□□ 0.82
HLA-A-209ENST00000638375 GBP1P32455 592 aa20.2■□□□□ 0.82
HLA-A-209ENST00000638375 KPNA1P52294 538 aaPredicted RBP20.2■□□□□ 0.82
HLA-A-209ENST00000638375 VAV2P52735 878 aa20.2■□□□□ 0.82
HLA-A-209ENST00000638375 DEUP1Q05D60 604 aa20.2■□□□□ 0.82
HLA-A-209ENST00000638375 ZC3H12AQ5D1E8 599 aaKnown RBP20.2■□□□□ 0.82
HLA-A-209ENST00000638375 HTR3DQ70Z44 454 aa20.2■□□□□ 0.82
HLA-A-209ENST00000638375 GJD3Q8N144 294 aa20.2■□□□□ 0.82
HLA-A-209ENST00000638375 RFFLQ8WZ73 363 aa20.2■□□□□ 0.82
HLA-A-209ENST00000638375 BTBD6Q96KE9 485 aa20.2■□□□□ 0.82
HLA-A-209ENST00000638375 ZNF830Q96NB3 372 aaPredicted RBP20.2■□□□□ 0.82
HLA-A-209ENST00000638375 CNPY3Q9BT09 278 aa20.2■□□□□ 0.82
HLA-A-209ENST00000638375 OSGEPQ9NPF4 335 aa20.2■□□□□ 0.82
HLA-A-209ENST00000638375 LUC7LQ9NQ29 371 aaKnown RBP20.2■□□□□ 0.82
HLA-A-209ENST00000638375 UVRAGQ9P2Y5 699 aa20.2■□□□□ 0.82
HLA-A-209ENST00000638375 A0A0U1RQJ8 604 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 PSMA2P25787 234 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 CORO1AP31146 461 aaKnown RBP20.19■□□□□ 0.82
HLA-A-209ENST00000638375 RDXP35241 583 aaKnown RBP20.19■□□□□ 0.82
HLA-A-209ENST00000638375 CXCR3P49682 368 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 KRT83P78385 493 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 STRADAQ7RTN6 431 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 BBS7Q8IWZ6 715 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 SLC35G2Q8TBE7 412 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 FAM172AQ8WUF8 416 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 ATRIPQ8WXE1 791 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 ZFYVE19Q96K21 471 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 LACRTQ9GZZ8 138 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 ANAPC7Q9UJX3 599 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 LSM7Q9UK45 103 aaKnown RBP20.19■□□□□ 0.82
HLA-A-209ENST00000638375 ADGRG1Q9Y653 693 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 WNT6Q9Y6F9 365 aa20.19■□□□□ 0.82
HLA-A-209ENST00000638375 KIF26AQ9ULI4 1882 aaPredicted RBP20.19■□□□□ 0.82
HLA-A-209ENST00000638375 PJA2O43164 708 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 NRDCO43847 1150 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 MTA2O94776 668 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 GDI1P31150 447 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 HDAC4P56524 1084 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 TCEAL1Q15170 157 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 NUGGCQ68CJ6 796 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 TRIM68Q6AZZ1 485 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 RNF135Q8IUD6 432 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 DENND1CQ8IV53 801 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 RHOT2Q8IXI1 618 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 YAF2Q8IY57 180 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 KIAA1958Q8N8K9 716 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 OSCP1Q8WVF1 389 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 FAM83CQ9BQN1 747 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 TRMT61BQ9BVS5 477 aaKnown RBP20.18■□□□□ 0.82
HLA-A-209ENST00000638375 DCLK3Q9C098 648 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 LINC00597Q9H2U6 94 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 ANLNQ9NQW6 1124 aa20.18■□□□□ 0.82
HLA-A-209ENST00000638375 THG1LQ9NWX6 298 aaKnown RBP20.18■□□□□ 0.82
HLA-A-209ENST00000638375 XPO7Q9UIA9 1087 aaKnown RBP20.18■□□□□ 0.82
HLA-A-209ENST00000638375 AGO1Q9UL18 857 aaKnown RBP20.18■□□□□ 0.82
HLA-A-209ENST00000638375 KCNU1A8MYU2 1149 aa20.17■□□□□ 0.82
HLA-A-209ENST00000638375 I6L893 689 aaPredicted RBP20.17■□□□□ 0.82
HLA-A-209ENST00000638375 CHADO15335 359 aa20.17■□□□□ 0.82
HLA-A-209ENST00000638375 NARSO43776 548 aaKnown RBP20.17■□□□□ 0.82
HLA-A-209ENST00000638375 F9P00740 461 aa20.17■□□□□ 0.82
HLA-A-209ENST00000638375 CCR1P32246 355 aa20.17■□□□□ 0.82
HLA-A-209ENST00000638375 HARS2P49590 506 aaKnown RBP20.17■□□□□ 0.82
HLA-A-209ENST00000638375 TDGQ13569 410 aa20.17■□□□□ 0.82
HLA-A-209ENST00000638375 PPP2R5DQ14738 602 aa20.17■□□□□ 0.82
HLA-A-209ENST00000638375 ARHGAP29Q52LW3 1261 aa20.17■□□□□ 0.82
HLA-A-209ENST00000638375 CC2D1AQ6P1N0 951 aaPredicted RBP20.17■□□□□ 0.82
HLA-A-209ENST00000638375 KIAA1328Q86T90 577 aa20.17■□□□□ 0.82
HLA-A-209ENST00000638375 FAM131BQ86XD5 332 aa20.17■□□□□ 0.82
HLA-A-209ENST00000638375 UNC45BQ8IWX7 931 aa20.17■□□□□ 0.82
HLA-A-209ENST00000638375 ARFGAP1Q8N6T3 406 aa20.17■□□□□ 0.82
HLA-A-209ENST00000638375 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.17■□□□□ 0.82
HLA-A-209ENST00000638375 DUS2Q9NX74 493 aaKnown RBP20.17■□□□□ 0.82
HLA-A-209ENST00000638375 SALL4Q9UJQ4 1053 aa20.17■□□□□ 0.82
HLA-A-209ENST00000638375 ARNTLO00327 626 aa20.16■□□□□ 0.82
HLA-A-209ENST00000638375 MOCS2O96007 188 aaPredicted RBP20.16■□□□□ 0.82
HLA-A-209ENST00000638375 APOEP02649 317 aa20.16■□□□□ 0.82
HLA-A-209ENST00000638375 ARSAP15289 507 aa20.16■□□□□ 0.82
HLA-A-209ENST00000638375 IFNAR2P48551 515 aa20.16■□□□□ 0.82
HLA-A-209ENST00000638375 EML3Q32P44 896 aa20.16■□□□□ 0.82
HLA-A-209ENST00000638375 SND1Q7KZF4 910 aaKnown RBP eCLIP20.16■□□□□ 0.823e-14■■■■□ 20
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms