RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 RNF139Q8WU17 664 aa12.98□□□□□ -0.33
CACNA1A-219ENST00000635917 C9orf72Q96LT7 481 aa12.98□□□□□ -0.33
CACNA1A-219ENST00000635917 COLEC11Q9BWP8 271 aa12.98□□□□□ -0.33
CACNA1A-219ENST00000635917 GPR62Q9BZJ7 368 aa12.98□□□□□ -0.33
CACNA1A-219ENST00000635917 RNF208Q9H0X6 261 aa12.98□□□□□ -0.33
CACNA1A-219ENST00000635917 HCSTQ9UBK5 93 aa12.98□□□□□ -0.33
CACNA1A-219ENST00000635917 ADAM28Q9UKQ2 775 aa12.98□□□□□ -0.33
CACNA1A-219ENST00000635917 NOVA2Q9UNW9 492 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-219ENST00000635917 PCDHB7Q9Y5E2 793 aa12.98□□□□□ -0.33
CACNA1A-219ENST00000635917 LTBP2Q14767 1821 aa12.98□□□□□ -0.33
CACNA1A-219ENST00000635917 H7C0C1 242 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 SMAPO00193 183 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 DCLK1O15075 740 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 TBC1D4O60343 1298 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 PQBP1O60828 265 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 EFEMP2O95967 443 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 FGFR3P22607 806 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 ATP5OP48047 213 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 PGFP49763 221 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 SLC5A3P53794 718 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 RNASELQ05823 741 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 NME3Q13232 169 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 MSS51Q4VC12 460 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 SLC45A4Q5BKX6 768 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 DNAJC21Q5F1R6 531 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 VARS2Q5ST30 1063 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 FAM182AQ5T1J6 154 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 C6orf118Q5T5N4 469 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 C1orf53Q5VUE5 145 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 CEP128Q6ZU80 1094 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 CROCCP2Q86T23 111 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 ADAM32Q8TC27 787 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 SCLYQ96I15 445 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 FUBP3Q96I24 572 aaKnown RBP eCLIP12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 TOX2Q96NM4 488 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 ZMYND8Q9ULU4 1186 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 DOCK4Q8N1I0 1966 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 CAPN9O14815 690 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 RASGRF2O14827 1237 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 KCNN4O15554 427 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 TRAPPC3O43617 180 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 F9P00740 461 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 MYCP01106 439 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 ARL4AP40617 200 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 HCAR3P49019 387 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 SLC11A1P49279 550 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 MAGOHP61326 146 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 PAFAH1B3Q15102 231 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 SLC39A12Q504Y0 691 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 FNBP1LQ5T0N5 605 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 KCNT2Q6UVM3 1135 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 SPATA2LQ8IUW3 424 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 EDEM1Q92611 657 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 SERPINB12Q96P63 405 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 QKIQ96PU8 341 aaKnown RBP eCLIP12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 CAPS2Q9BXY5 557 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 SAYSD1Q9NPB0 183 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 IL37Q9NZH6 218 aa12.97□□□□□ -0.33
CACNA1A-219ENST00000635917 SHROOM3Q8TF72 1996 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 CLUHO75153 1309 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 SYNJ2BP-COX16A0A087WUM0 186 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 EIF3HO15372 352 aaKnown RBP eCLIP12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 MFSD11O43934 449 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 GCATO75600 419 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 AGTP01019 485 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 CAPN2P17655 700 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 GCAP28676 217 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 ATP1A2P50993 1020 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 IRAK1P51617 712 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 IFI35P80217 286 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 HIF1AQ16665 826 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 LONRF1Q17RB8 773 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 SCD5Q86SK9 330 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 TAC4Q86UU9 113 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 NPAS4Q8IUM7 802 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 DQX1Q8TE96 717 aaKnown RBP12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 LRRN4Q8WUT4 740 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 FAM193BQ96PV7 902 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 CENPHQ9H3R5 247 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 HIPK3Q9H422 1215 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 DDIT4Q9NX09 232 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 COX16Q9P0S2 106 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 PAK5Q9P286 719 aa12.96□□□□□ -0.33
CACNA1A-219ENST00000635917 FAM92AA1XBS5 289 aa12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 C5orf60A6NFR6 353 aa12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 H3BRJ5 948 aa12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 CHADO15335 359 aa12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 TADA2AO75478 443 aa12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 BANF1O75531 89 aa12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 PARNO95453 639 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 VNN2O95498 520 aa12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 GALTP07902 379 aa12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 VAV1P15498 845 aa12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 MAGEA11P43364 429 aa12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 ATN1P54259 1190 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 GPX6P59796 221 aa12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 PPP2R2AP63151 447 aa12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 PRKD1Q15139 912 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 NFE2Q16621 373 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-219ENST00000635917 EFHC2Q5JST6 749 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms