RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 PPA1Q15181 289 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 FILIP1LQ4L180 1135 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 CAVIN4Q5BKX8 364 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 C3orf38Q5JPI3 329 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 MEX3CQ5U5Q3 659 aaKnown RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 IZUMO3Q5VZ72 239 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 LIN54Q6MZP7 749 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF783Q6ZMS7 281 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 MED25Q71SY5 747 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 NUP54Q7Z3B4 507 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 PPP1R42Q7Z4L9 355 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 GALNT7Q86SF2 657 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 Q8NA96 180 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 TOR1AIP2Q8NFQ8 470 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 OR52K2Q8NGK3 314 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 GOT1L1Q8NHS2 421 aaPredicted RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 TBC1D15Q8TC07 691 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 PROKR1Q8TCW9 393 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 UTP15Q8TED0 518 aaKnown RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 TRAPPC12Q8WVT3 735 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 BRI3BPQ8WY22 251 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 KIAA1191Q96A73 305 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF845Q96IR2 970 aaPredicted RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 LRIG1Q96JA1 1093 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 CNDP1Q96KN2 507 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 FAM81BQ96LP2 452 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ZSCAN31Q96LW9 406 aaPredicted RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 RMDN2Q96LZ7 410 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 SPATA5L1Q9BVQ7 753 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 TLR10Q9BXR5 811 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 TEX13BQ9BXU2 312 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ARHGAP39Q9C0H5 1083 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 SLC7A5P2Q9GIP4 190 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 NCOR1P1Q9H4R4 102 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 JMJD4Q9H9V9 463 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 GRPEL1Q9HAV7 217 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF287Q9HBT7 754 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF304Q9HCX3 659 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 SLAMF7Q9NQ25 335 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 EXOC1Q9NV70 894 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 QPCTLQ9NXS2 382 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 TMOD4Q9NZQ9 345 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 CTTNBP2NLQ9P2B4 639 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 AASSQ9UDR5 926 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 AFF4Q9UHB7 1163 aaKnown RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 EIF2B4Q9UI10 523 aaKnown RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 OGDHLQ9ULD0 1010 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 CORO2BQ9UQ03 480 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF711Q9Y462 761 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 PLEKHM1Q9Y4G2 1056 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 TRIM17Q9Y577 477 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ANGPTL3Q9Y5C1 460 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 BRD4O60885 1362 aaPredicted RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 RNF123Q5XPI4 1314 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 A0A1W2PPC4 97 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 A0A1W2PPH5 198 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 PGPEP1LA6NFU8 196 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 MARCH11A6NNE9 402 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 LACTBL1A8MY62 500 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 H0YC42 278 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 FYB1O15117 783 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 NCK2O43639 380 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ZBTB14O43829 449 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 SRGAP2O75044 1071 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 PALMO75781 387 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 STAM2O75886 525 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 FGF18O76093 207 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 UNC5CO95185 931 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 KIF20AO95235 890 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 SGPL1O95470 568 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 GNAI2P04899 355 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 POLBP06746 335 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ELANEP08246 267 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF853P0CG23 659 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 CKMT1AP12532 417 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 SCG2P13521 617 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 IL1R1P14778 569 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 VEGFAP15692 232 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ALOX12P18054 663 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 TFEBP19484 476 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 IL11P20809 199 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 PROZP22891 400 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 TNFSF4P23510 183 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 TMOD1P28289 359 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 PBLDP30039 288 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 APOBEC3AP31941 199 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 HOXD13P35453 343 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 SKIV2L2P42285 1042 aaKnown RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ASMTP46597 345 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 KCNJ5P48544 419 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 SLC11A2P49281 568 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 MCM2P49736 904 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF135P52742 658 aaPredicted RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 NR1H2P55055 460 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 C21orf58P58505 322 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 NLRP5P59047 1200 aa3.19□□□□□ -1.9
PSPC1-208ENST00000635562 POLR2FP61218 127 aaKnown RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 RPS16P62249 146 aaKnown RBP3.19□□□□□ -1.9
PSPC1-208ENST00000635562 NHLH2Q02577 135 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms