RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 BEND5Q7L4P6 421 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 CCDC33Q8N5R6 958 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 TERB1Q8NA31 727 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 CPXM1Q96SM3 734 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 HINFPQ9BQA5 517 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 GANQ9H2C0 597 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 NLRC4Q9NPP4 1024 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 VPS13AQ96RL7 3174 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 SYCE3A1L190 88 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 GFPT2O94808 682 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 KLF8O95600 359 aaPredicted RBP16.35■□□□□ 0.21
LINC00339-207ENST00000634712 LATS1O95835 1130 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 STAT1P42224 750 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 PXNP49023 591 aaPredicted RBP16.35■□□□□ 0.21
LINC00339-207ENST00000634712 ZNF445P59923 1031 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 DMWDQ09019 674 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 MESP2Q0VG99 397 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 FILIP1LQ4L180 1135 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 MPPE1Q53F39 396 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 EOGTQ5NDL2 527 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 ADGRF1Q5T601 910 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 EMC10Q5UCC4 262 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 TRMT11Q7Z4G4 463 aaKnown RBP16.35■□□□□ 0.21
LINC00339-207ENST00000634712 WDR5BQ86VZ2 330 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 SFTPA1Q8IWL2 248 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 PIAS4Q8N2W9 510 aaPredicted RBP16.35■□□□□ 0.21
LINC00339-207ENST00000634712 PHTF2Q8N3S3 785 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 ALLCQ8N6M5 410 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 TXNDC5Q8NBS9 432 aaKnown RBP16.35■□□□□ 0.21
LINC00339-207ENST00000634712 TSTD1Q8NFU3 115 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 KCNV2Q8TDN2 545 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 DQX1Q8TE96 717 aaKnown RBP16.35■□□□□ 0.21
LINC00339-207ENST00000634712 TMA16Q96EY4 203 aaKnown RBP16.35■□□□□ 0.21
LINC00339-207ENST00000634712 HHIPQ96QV1 700 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 POLR3BQ9NW08 1133 aaPredicted RBP16.35■□□□□ 0.21
LINC00339-207ENST00000634712 MMP17Q9ULZ9 603 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 SIK3Q9Y2K2 1263 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 MYO15AQ9UKN7 3530 aa16.35■□□□□ 0.21
LINC00339-207ENST00000634712 CCDC163A0A0D9SF12 145 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 TRIM24O15164 1050 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 TSPAN3O60637 253 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 APBB3O95704 486 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 PENKP01210 267 aaPredicted RBP16.34■□□□□ 0.21
LINC00339-207ENST00000634712 FYNP06241 537 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 GLI1P08151 1106 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 ATP1A3P13637 1013 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 SOX5P35711 763 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 TPM4P67936 248 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 CDK17Q00537 523 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 RING1Q06587 406 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 SKOR2Q2VWA4 1001 aaPredicted RBP16.34■□□□□ 0.21
LINC00339-207ENST00000634712 DCAF6Q58WW2 860 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 FYB2Q5VWT5 728 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 SYPL2Q5VXT5 272 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 SDE2Q6IQ49 451 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 PRR23BQ6ZRT6 265 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 TOGARAM2Q6ZUX3 1019 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 CEP68Q76N32 757 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 ERICH1Q86X53 443 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 DHX40Q8IX18 779 aaKnown RBP16.34■□□□□ 0.21
LINC00339-207ENST00000634712 ZNF513Q8N8E2 541 aaPredicted RBP16.34■□□□□ 0.21
LINC00339-207ENST00000634712 MSANTD4Q8NCY6 345 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 ADAM32Q8TC27 787 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 DDX50Q9BQ39 737 aaKnown RBP16.34■□□□□ 0.21
LINC00339-207ENST00000634712 ASNSD1Q9NWL6 643 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 TJP2Q9UDY2 1190 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 TLR6Q9Y2C9 796 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 FANCMQ8IYD8 2048 aa16.34■□□□□ 0.21
LINC00339-207ENST00000634712 AXIN1O15169 862 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 HSF2BPO75031 334 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 ALDH1A2O94788 518 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 APOEP02649 317 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 GBP1P32455 592 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 KIR2DL1P43626 348 aaPredicted RBP16.33■□□□□ 0.2
LINC00339-207ENST00000634712 DGKEP52429 567 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 SLC6A3Q01959 620 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 NNTQ13423 1086 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 SIM2Q14190 667 aaPredicted RBP16.33■□□□□ 0.2
LINC00339-207ENST00000634712 FAM183BPQ6ZVS7 135 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 CACNA2D4Q7Z3S7 1137 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 NOP9Q86U38 636 aaKnown RBP16.33■□□□□ 0.2
LINC00339-207ENST00000634712 ZNF677Q86XU0 584 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 ZDHHC17Q8IUH5 632 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 FAM217AQ8IXS0 508 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 IL17RCQ8NAC3 791 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 RNF34Q969K3 372 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 AZIN2Q96A70 460 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 ERGIC2Q96RQ1 377 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 HSD3B7Q9H2F3 369 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 EPC1Q9H2F5 836 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 POLMQ9NP87 494 aaPredicted RBP16.33■□□□□ 0.2
LINC00339-207ENST00000634712 NCDNQ9UBB6 729 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 SLC12A6Q9UHW9 1150 aa16.33■□□□□ 0.2
LINC00339-207ENST00000634712 DMDP11532 3685 aa16.32■□□□□ 0.2
LINC00339-207ENST00000634712 TYW5A2RUC4 315 aaKnown RBP16.32■□□□□ 0.2
LINC00339-207ENST00000634712 ANTXRLA6NF34 631 aa16.32■□□□□ 0.2
LINC00339-207ENST00000634712 ZBTB24O43167 697 aaPredicted RBP16.32■□□□□ 0.2
LINC00339-207ENST00000634712 HRO43593 1189 aa16.32■□□□□ 0.2
LINC00339-207ENST00000634712 ACSL4O60488 711 aa16.32■□□□□ 0.2
LINC00339-207ENST00000634712 GRAP2O75791 330 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms