RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 TMEM215Q68D42 235 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 ISM2Q6H9L7 571 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 NUDT18Q6ZVK8 323 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 UBA3Q8TBC4 463 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 TFAP2BQ92481 460 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 CDK5RAP1Q96SZ6 601 aaKnown RBP17.35■□□□□ 0.37
PDCD6-214ENST00000628729 TSG101Q99816 390 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 ARMCX3Q9UH62 379 aaPredicted RBP17.35■□□□□ 0.37
PDCD6-214ENST00000628729 STON1Q9Y6Q2 735 aa17.35■□□□□ 0.37
PDCD6-214ENST00000628729 SLC12A8A0AV02 714 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 YJEFN3A6XGL0 299 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 E7ENQ6 273 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 GFRA2O00451 464 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 MAPK8P45983 427 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 FMO5P49326 533 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 ZNF252P-AS1Q0IIN9 211 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 BST2Q10589 180 aaKnown RBP17.34■□□□□ 0.37
PDCD6-214ENST00000628729 TRIP4Q15650 581 aaPredicted RBP17.34■□□□□ 0.37
PDCD6-214ENST00000628729 FUT11Q495W5 492 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 SGO2Q562F6 1265 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 DAB2IPQ5VWQ8 1189 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 SLC23A3Q6PIS1 610 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 RSRC2Q7L4I2 434 aaKnown RBP17.34■□□□□ 0.37
PDCD6-214ENST00000628729 ARHGAP18Q8N392 663 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 EDEM1Q92611 657 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 SMARCE1Q969G3 411 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 MKRN2Q9H000 416 aaKnown RBP17.34■□□□□ 0.37
PDCD6-214ENST00000628729 CAPN10Q9HC96 672 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 MAN1B1Q9UKM7 699 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 ZNF510Q9Y2H8 683 aa17.34■□□□□ 0.37
PDCD6-214ENST00000628729 RNF225M0QZC1 329 aaPredicted RBP17.33■□□□□ 0.36
PDCD6-214ENST00000628729 AP5Z1O43299 807 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 MSI1O43347 362 aaKnown RBP17.33■□□□□ 0.36
PDCD6-214ENST00000628729 TOP3BO95985 862 aaKnown RBP17.33■□□□□ 0.36
PDCD6-214ENST00000628729 CD19P15391 556 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 HOXD9P28356 352 aaPredicted RBP17.33■□□□□ 0.36
PDCD6-214ENST00000628729 ZNF33AQ06730 810 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 BYSLQ13895 437 aaKnown RBP17.33■□□□□ 0.36
PDCD6-214ENST00000628729 ST3GAL2Q16842 350 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 UAP1L1Q3KQV9 507 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 TTI2Q6NXR4 508 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 FMNL3Q8IVF7 1028 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 CPXM2Q8N436 756 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 DEFB124Q8NES8 71 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 OR2I1PQ8NGU4 316 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 LMO3Q8TAP4 145 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 SORCS1Q8WY21 1168 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 CCDC34Q96HJ3 373 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 HSPA12BQ96MM6 686 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 DCLK3Q9C098 648 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 DNAI2Q9GZS0 605 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 THAP10Q9P2Z0 257 aaPredicted RBP17.33■□□□□ 0.36
PDCD6-214ENST00000628729 SFMBT1Q9UHJ3 866 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 IGF2RP11717 2491 aa17.33■□□□□ 0.36
PDCD6-214ENST00000628729 KCNJ18B7U540 433 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 SMC2O95347 1197 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 CFIP05156 583 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 SPINK2P20155 84 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 CSRP1P21291 193 aaKnown RBP17.32■□□□□ 0.36
PDCD6-214ENST00000628729 PRKCHP24723 683 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 HOXD12P35452 270 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 CHKAP35790 457 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 SGSHP51688 502 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 DAOAP59103 153 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 LMAN2Q12907 356 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 BSPRYQ5W0U4 402 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 KIAA1324Q6UXG2 1013 aaKnown RBP17.32■□□□□ 0.36
PDCD6-214ENST00000628729 SLC36A4Q6YBV0 504 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 ANKS1BQ7Z6G8 1248 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 PLD4Q96BZ4 506 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 TIGD1Q96MW7 591 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 NUSAP1Q9BXS6 441 aaKnown RBP17.32■□□□□ 0.36
PDCD6-214ENST00000628729 USP36Q9P275 1121 aaKnown RBP17.32■□□□□ 0.36
PDCD6-214ENST00000628729 STRIP2Q9ULQ0 834 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 CACNA1EQ15878 2313 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 CHD6Q8TD26 2715 aa17.32■□□□□ 0.36
PDCD6-214ENST00000628729 PIK3R2O00459 728 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 ZNF217O75362 1048 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 SETSIPP0DME0 302 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 VDRP11473 427 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 BRD2P25440 801 aaKnown RBP17.31■□□□□ 0.36
PDCD6-214ENST00000628729 COPAP53621 1224 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 ZNF234Q14588 700 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 SDE2Q6IQ49 451 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 ARHGEF19Q8IW93 802 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 TRIML1Q8N9V2 468 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 WFDC5Q8TCV5 224 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 CLEC4CQ8WTT0 213 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 KCTD13Q8WZ19 329 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 LRRC4Q9HBW1 653 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 HESX1Q9UBX0 185 aa17.31■□□□□ 0.36
PDCD6-214ENST00000628729 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.31■□□□□ 0.36
PDCD6-214ENST00000628729 GOLGA6L4A6NEF3 574 aa17.3■□□□□ 0.36
PDCD6-214ENST00000628729 PPP1R3GB7ZBB8 358 aa17.3■□□□□ 0.36
PDCD6-214ENST00000628729 PSMA7O14818 248 aa17.3■□□□□ 0.36
PDCD6-214ENST00000628729 TSPAN3O60637 253 aa17.3■□□□□ 0.36
PDCD6-214ENST00000628729 SERPINF2P08697 491 aa17.3■□□□□ 0.36
PDCD6-214ENST00000628729 CEACAM1P13688 526 aa17.3■□□□□ 0.36
PDCD6-214ENST00000628729 TBXAS1P24557 533 aaPredicted RBP17.3■□□□□ 0.36
PDCD6-214ENST00000628729 HLA-FP30511 346 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms