RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 ANTXRLA6NF34 631 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 FOXD2O60548 495 aaPredicted RBP16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 LATS1O95835 1130 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 MBD3O95983 291 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 PENKP01210 267 aaPredicted RBP16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 EEF1GP26641 437 aaKnown RBP16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 KRT9P35527 623 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 SLC11A2P49281 568 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 BPIFB4P59827 614 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 BYSLQ13895 437 aaKnown RBP16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 MPPE1Q53F39 396 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 TCP11X2Q5H9J9 407 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 NUGGCQ68CJ6 796 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 MSANTD2Q6P1R3 559 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 TMEM92Q6UXU6 159 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 RASSF3Q86WH2 238 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 GPT2Q8TD30 523 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 CLEC4CQ8WTT0 213 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 HMGB4Q8WW32 186 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 SPACA7Q96KW9 195 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 ZDHHC4Q9NPG8 344 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 NFE2L3Q9Y4A8 694 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 CEP83Q9Y592 693 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 EML5Q05BV3 1969 aa16.6■□□□□ 0.25
CHRNA4-211ENST00000628606 TCRBV21S2A2A0A5A6 115 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 BECN2A8MW95 431 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 MSI1O43347 362 aaKnown RBP16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 GABBR2O75899 941 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 CISD3P0C7P0 127 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 HOXB2P14652 356 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 TBX4P57082 545 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 APBA1Q02410 837 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 RAPGEF1Q13905 1077 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 ADGRF1Q5T601 910 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 FYB2Q5VWT5 728 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 TOGARAM2Q6ZUX3 1019 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 MDGA1Q8NFP4 955 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 ENOX1Q8TC92 643 aaKnown RBP16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 TMA16Q96EY4 203 aaKnown RBP16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 ZC3H10Q96K80 434 aaKnown RBP16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 SERPINB11Q96P15 392 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 DDX50Q9BQ39 737 aaKnown RBP16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 SLC2A11Q9BYW1 496 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 PDCL3Q9H2J4 239 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 ACP6Q9NPH0 428 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 SAMSN1Q9NSI8 373 aaKnown RBP16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 SEMA4GQ9NTN9 838 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 ANO10Q9NW15 660 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 FBXO10Q9UK96 956 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 SLC27A6Q9Y2P4 619 aa16.59■□□□□ 0.25
CHRNA4-211ENST00000628606 DMXL1Q9Y485 3027 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 PRRT4C9JH25 899 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 E5RJQ4 531 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 DCLK1O15075 740 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 NPC1O15118 1278 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 MAP3K13O43283 966 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 TSPAN3O60637 253 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 ADAM23O75077 832 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 WASP42768 502 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 RPL34P49207 117 aaKnown RBP16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 ARID5AQ03989 594 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 RING1Q06587 406 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 CSRP2Q16527 193 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 PLK5Q496M5 336 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 MIIPQ5JXC2 388 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 EGFLAMQ63HQ2 1017 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 ANKS1BQ7Z6G8 1248 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 TMEM110Q86TL2 294 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 FAM217AQ8IXS0 508 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 ANKRD20A12PQ8NF67 263 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 SLC4A5Q9BY07 1137 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 ARRDC1-AS1Q9H2J1 176 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 INVSQ9Y283 1065 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 PCDHGA5Q9Y5G8 931 aa16.58■□□□□ 0.24
CHRNA4-211ENST00000628606 CEP250Q9BV73 2442 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 TYW5A2RUC4 315 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 FOXN3O00409 490 aaPredicted RBP16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 GFRA2O00451 464 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 EPN2O95208 641 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 HNRNPLP14866 589 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 YWHAZP63104 245 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 PDCLQ13371 301 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 PUM1Q14671 1186 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 STARD3Q14849 445 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 RSPO4Q2I0M5 234 aaPredicted RBP16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 RBM43Q6ZSC3 357 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 BEND5Q7L4P6 421 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 CCDC117Q8IWD4 279 aaPredicted RBP16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 PPP1R13BQ96KQ4 1090 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 DUSP15Q9H1R2 295 aaPredicted RBP16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 SYNCQ9H7C4 482 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 POPDC2Q9HBU9 364 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 PARD6AQ9NPB6 346 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 SIX2Q9NPC8 291 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 STOML2Q9UJZ1 356 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 CDV3Q9UKY7 258 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 PCDHGC3Q9UN70 934 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 NAALADL1Q9UQQ1 740 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 TLR6Q9Y2C9 796 aa16.57■□□□□ 0.24
CHRNA4-211ENST00000628606 ABCA7Q8IZY2 2146 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms