RNA–Protein interactions for RNA: ENST00000628397.2

CCDC163-205, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-205ENST00000628397 CALCOCO1Q9P1Z2 691 aa12.72□□□□□ -0.37
CCDC163-205ENST00000628397 PCSK1NQ9UHG2 260 aa12.72□□□□□ -0.37
CCDC163-205ENST00000628397 USP15Q9Y4E8 981 aaPredicted RBP12.72□□□□□ -0.37
CCDC163-205ENST00000628397 CPQQ9Y646 472 aa12.72□□□□□ -0.37
CCDC163-205ENST00000628397 TRANK1O15050 2925 aa12.72□□□□□ -0.37
CCDC163-205ENST00000628397 ENDOD1O94919 500 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 IRF1P10914 325 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 SLC2A3P11169 496 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 CCR1P32246 355 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 CXCR3P49682 368 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 SLC7A9P82251 487 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 COG7P83436 770 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 RING1Q06587 406 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 SMAD4Q13485 552 aaKnown RBP12.71□□□□□ -0.37
CCDC163-205ENST00000628397 CBX2Q14781 532 aaPredicted RBP12.71□□□□□ -0.37
CCDC163-205ENST00000628397 ARL13BQ3SXY8 428 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 RAB6CQ53S08 254 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 BRMS1LQ5PSV4 323 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 NUGGCQ68CJ6 796 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 SLFN11Q7Z7L1 901 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 NT5DC3Q86UY8 548 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 NPAS3Q8IXF0 933 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 RHOT1Q8IXI2 618 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 CMTM8Q8IZV2 173 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 TTC16Q8NEE8 873 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 HLA-CQ95604 372 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 PLD4Q96BZ4 506 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 CYP2S1Q96SQ9 504 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 KLF16Q9BXK1 252 aaPredicted RBP12.71□□□□□ -0.37
CCDC163-205ENST00000628397 RAB6CQ9H0N0 254 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 WDCPQ9H6R7 721 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 ZWILCHQ9H900 591 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 USP18Q9UMW8 372 aa12.71□□□□□ -0.37
CCDC163-205ENST00000628397 CDH23Q9H251 3354 aa12.71□□□□□ -0.38
CCDC163-205ENST00000628397 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 MIF4GDA9UHW6 222 aaKnown RBP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 ESPNB1AK53 854 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 PSTPIP1O43586 416 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 MOCS2O96007 188 aaPredicted RBP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 KRT7P08729 469 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 TCF4P15884 667 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 GBP2P32456 591 aaPredicted RBP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 HARS2P49590 506 aaKnown RBP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 DNA2P51530 1060 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 AIF1P55008 147 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 TAS2R40P59535 323 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 SLC25A11Q02978 314 aaKnown RBP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 PPP2R5DQ14738 602 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 SMTNL2Q2TAL5 461 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 ODF2Q5BJF6 829 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 ZC3H12AQ5D1E8 599 aaKnown RBP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 EFHC2Q5JST6 749 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 ARFGAP1Q8N6T3 406 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 UBL4BQ8N7F7 174 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 ATP6V0D2Q8N8Y2 350 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 ZSCAN18Q8TBC5 510 aaPredicted RBP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 FGF13Q92913 245 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 FCRL2Q96LA5 508 aaPredicted RBP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 PEBP4Q96S96 227 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 TKTL2Q9H0I9 626 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 SMG9Q9H0W8 520 aaKnown RBP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 POMKQ9H5K3 350 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 SLC12A6Q9UHW9 1150 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 LSM7Q9UK45 103 aaKnown RBP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 CDH7Q9ULB5 785 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 ARHGAP26Q9UNA1 814 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 PACSIN2Q9UNF0 486 aaPredicted RBP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC163-205ENST00000628397 SH3BP1Q9Y3L3 701 aa12.7□□□□□ -0.38
CCDC163-205ENST00000628397 DOCK8Q8NF50 2099 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 CCDC66A2RUB6 948 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 KIF2AO00139 706 aaPredicted RBP12.69□□□□□ -0.38
CCDC163-205ENST00000628397 STC2O76061 302 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 IGLV3-27P01718 113 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 KRT1P04264 644 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 CTNNA2P26232 953 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 IL1R2P27930 398 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 CORO1AP31146 461 aaKnown RBP12.69□□□□□ -0.38
CCDC163-205ENST00000628397 CTNNA1P35221 906 aaKnown RBP12.69□□□□□ -0.38
CCDC163-205ENST00000628397 KCNQ1P51787 676 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 MTA1Q13330 715 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 EIF4EBP2Q13542 120 aaPredicted RBP12.69□□□□□ -0.38
CCDC163-205ENST00000628397 MEI1Q5TIA1 1274 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 POLNQ7Z5Q5 900 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 ARID3BQ8IVW6 561 aaPredicted RBP12.69□□□□□ -0.38
CCDC163-205ENST00000628397 UNC45BQ8IWX7 931 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 CCDC185Q8N715 623 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 MAFAQ8NHW3 353 aaPredicted RBP12.69□□□□□ -0.38
CCDC163-205ENST00000628397 UBE2Q2Q8WVN8 375 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 TEKT4Q8WW24 435 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 SUSD6Q92537 303 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 HSPH1Q92598 858 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 NTAN1Q96AB6 310 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 SLC39A13Q96H72 371 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 ZFRQ96KR1 1074 aaKnown RBP12.69□□□□□ -0.38
CCDC163-205ENST00000628397 ZSWIM3Q96MP5 696 aa12.69□□□□□ -0.38
CCDC163-205ENST00000628397 SNRNP25Q9BV90 132 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms