RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 TFR2Q9UP52 801 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 REXO2Q9Y3B8 237 aaKnown RBP19.61■□□□□ 0.73
MECP2-216ENST00000627864 E2F8A0AVK6 867 aa19.6■□□□□ 0.73
MECP2-216ENST00000627864 F9P00740 461 aa19.6■□□□□ 0.73
MECP2-216ENST00000627864 PSMA2P25787 234 aa19.6■□□□□ 0.73
MECP2-216ENST00000627864 ZNF143P52747 638 aaPredicted RBP19.6■□□□□ 0.73
MECP2-216ENST00000627864 NNTQ13423 1086 aa19.6■□□□□ 0.73
MECP2-216ENST00000627864 ZC3H12AQ5D1E8 599 aaKnown RBP19.6■□□□□ 0.73
MECP2-216ENST00000627864 SH3PXD2AQ5TCZ1 1133 aa19.6■□□□□ 0.73
MECP2-216ENST00000627864 HTR3DQ70Z44 454 aa19.6■□□□□ 0.73
MECP2-216ENST00000627864 SND1Q7KZF4 910 aaKnown RBP eCLIP19.6■□□□□ 0.73
MECP2-216ENST00000627864 KIAA1328Q86T90 577 aa19.6■□□□□ 0.73
MECP2-216ENST00000627864 GJD3Q8N144 294 aa19.6■□□□□ 0.73
MECP2-216ENST00000627864 FCRL2Q96LA5 508 aaPredicted RBP19.6■□□□□ 0.73
MECP2-216ENST00000627864 PPP1R9BQ96SB3 815 aa19.6■□□□□ 0.73
MECP2-216ENST00000627864 CNPY3Q9BT09 278 aa19.6■□□□□ 0.73
MECP2-216ENST00000627864 TRMT61BQ9BVS5 477 aaKnown RBP19.6■□□□□ 0.73
MECP2-216ENST00000627864 DCLK3Q9C098 648 aa19.6■□□□□ 0.73
MECP2-216ENST00000627864 CALCOCO1Q9P1Z2 691 aa19.6■□□□□ 0.73
MECP2-216ENST00000627864 MIA3Q5JRA6 1907 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 CCP110O43303 1012 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 IGLV3-27P01718 113 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 DESP17661 470 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 CORO1AP31146 461 aaKnown RBP19.59■□□□□ 0.73
MECP2-216ENST00000627864 GDI1P31150 447 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 HARS2P49590 506 aaKnown RBP19.59■□□□□ 0.73
MECP2-216ENST00000627864 RING1Q06587 406 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 ARHGAP29Q52LW3 1261 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 RAB6CQ53S08 254 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 RNF135Q8IUD6 432 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 DENND1CQ8IV53 801 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 UNC45BQ8IWX7 931 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 SLC35G2Q8TBE7 412 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 ZNF564Q8TBZ8 553 aaPredicted RBP19.59■□□□□ 0.73
MECP2-216ENST00000627864 FAM172AQ8WUF8 416 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 PGAP3Q96FM1 320 aaPredicted RBP19.59■□□□□ 0.73
MECP2-216ENST00000627864 SLC39A13Q96H72 371 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 ZFYVE19Q96K21 471 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 ZNF830Q96NB3 372 aaPredicted RBP19.59■□□□□ 0.73
MECP2-216ENST00000627864 RAB6CQ9H0N0 254 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 CD320Q9NPF0 282 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 PIGVQ9NUD9 493 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.59■□□□□ 0.73
MECP2-216ENST00000627864 DUS2Q9NX74 493 aaKnown RBP19.59■□□□□ 0.73
MECP2-216ENST00000627864 UVRAGQ9P2Y5 699 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 ANAPC7Q9UJX3 599 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 WNT6Q9Y6F9 365 aa19.59■□□□□ 0.73
MECP2-216ENST00000627864 GREM1O60565 184 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 ENDOD1O94919 500 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 KLKB1P03952 638 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 RDXP35241 583 aaKnown RBP19.58■□□□□ 0.72
MECP2-216ENST00000627864 IFNAR2P48551 515 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 VAV2P52735 878 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 ATXN1P54253 815 aaKnown RBP19.58■□□□□ 0.72
MECP2-216ENST00000627864 FCHO2Q0JRZ9 810 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 EIF4EBP2Q13542 120 aaPredicted RBP19.58■□□□□ 0.72
MECP2-216ENST00000627864 TDGQ13569 410 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 NUGGCQ68CJ6 796 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 STRADAQ7RTN6 431 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 BBS7Q8IWZ6 715 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 RHOT2Q8IXI1 618 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 RFFLQ8WZ73 363 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 CENPIQ92674 756 aaPredicted RBP19.58■□□□□ 0.72
MECP2-216ENST00000627864 BTBD6Q96KE9 485 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 LINC00597Q9H2U6 94 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 BRD9Q9H8M2 597 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 OSGEPQ9NPF4 335 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 TBC1D14Q9P2M4 693 aa19.58■□□□□ 0.72
MECP2-216ENST00000627864 RCCD1A6NED2 376 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 SLC9A3R1O14745 358 aaPredicted RBP19.57■□□□□ 0.72
MECP2-216ENST00000627864 CHADO15335 359 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 MOCS2O96007 188 aaPredicted RBP19.57■□□□□ 0.72
MECP2-216ENST00000627864 APOEP02649 317 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 SLC2A3P11169 496 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 CCR1P32246 355 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 CXCR3P49682 368 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 ZNF252P-AS1Q0IIN9 211 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 Q6ZNB5 142 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 BNIPLQ7Z465 357 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 ATP6V0D2Q8N8Y2 350 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 FNIP1Q8TF40 1166 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 OSCP1Q8WVF1 389 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 WDCPQ9H6R7 721 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 IP6K2Q9UHH9 426 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 SLC12A6Q9UHW9 1150 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 AGO1Q9UL18 857 aaKnown RBP19.57■□□□□ 0.72
MECP2-216ENST00000627864 ZNF510Q9Y2H8 683 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 ADGRG1Q9Y653 693 aa19.57■□□□□ 0.72
MECP2-216ENST00000627864 MYO1FO00160 1098 aa19.56■□□□□ 0.72
MECP2-216ENST00000627864 NARSO43776 548 aaKnown RBP19.56■□□□□ 0.72
MECP2-216ENST00000627864 RNF8O76064 485 aa19.56■□□□□ 0.72
MECP2-216ENST00000627864 NOP2P46087 812 aaKnown RBP19.56■□□□□ 0.72
MECP2-216ENST00000627864 HDAC4P56524 1084 aa19.56■□□□□ 0.72
MECP2-216ENST00000627864 PPP2R5DQ14738 602 aa19.56■□□□□ 0.72
MECP2-216ENST00000627864 TRIM68Q6AZZ1 485 aa19.56■□□□□ 0.72
MECP2-216ENST00000627864 SCYL2Q6P3W7 929 aa19.56■□□□□ 0.72
MECP2-216ENST00000627864 FAM131BQ86XD5 332 aa19.56■□□□□ 0.72
MECP2-216ENST00000627864 TXLNBQ8N3L3 684 aa19.56■□□□□ 0.72
MECP2-216ENST00000627864 KIAA1958Q8N8K9 716 aa19.56■□□□□ 0.72
MECP2-216ENST00000627864 ASIC4Q96FT7 647 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms