RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TTC9BQ8N6N2 239 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 C12orf50Q8NA57 414 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 CMASQ8NFW8 434 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 FAM172AQ8WUF8 416 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 MAIP1Q8WWC4 291 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 SLC2A13Q96QE2 648 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 NCAPGQ9BPX3 1015 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 DDX23Q9BUQ8 820 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 HEMGNQ9BXL5 484 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 OSBPL8Q9BZF1 889 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 ULBP1Q9BZM6 244 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 UBXN6Q9BZV1 441 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 ZWILCHQ9H900 591 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 GDF3Q9NR23 364 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 STIM2Q9P246 746 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 IGSF9Q9P2J2 1179 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 PCSK1NQ9UHG2 260 aa9.9□□□□□ -0.82
PDLIM5-223ENST00000627587 hCG_1818297A0A087WSY0 165 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 ESYT3A0FGR9 886 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 TTI1O43156 1089 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 HSF2BPO75031 334 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 PHF2O75151 1096 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 FBXO21O94952 628 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 HEXIM1O94992 359 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 PDGFBP01127 241 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 KRT1P04264 644 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 SP100P23497 879 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 KLRC2P26717 231 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 PTPN7P35236 360 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 PGFP49763 221 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 TDGQ13569 410 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 SLC39A12Q504Y0 691 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 ZNF280DQ6N043 979 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 SPOCD1Q6ZMY3 1216 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 GSPT2Q8IYD1 628 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 RCOR2Q8IZ40 523 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 DCP1BQ8IZD4 617 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 DEFB106AQ8N104 65 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 C12orf76Q8N812 135 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 TMEM105Q8N8V8 129 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 CCDC26Q8TAB7 109 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 ATG4AQ8WYN0 398 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 SEC14L1Q92503 715 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 RUBCNQ92622 972 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 NXPE3Q969Y0 559 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 FAM149B1Q96BN6 582 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 KLHL5Q96PQ7 755 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 TBCBQ99426 244 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 MAGEB5Q9BZ81 275 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 CRISPLD1Q9H336 500 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 SLITRK6Q9H5Y7 841 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 DMAP1Q9NPF5 467 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 CNGB3Q9NQW8 809 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 MRPL17Q9NRX2 175 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 CHST7Q9NS84 486 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 USP3Q9Y6I4 520 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 ERLIN1O75477 346 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 DAB1O75553 588 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 USP17L7P0C7H9 530 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 EPCAMP16422 314 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 KDELR1P24390 212 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 IL4RP24394 825 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 ECHS1P30084 290 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 MATKP42679 507 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 COPS2P61201 443 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 YWHAZP63104 245 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 BRD3Q15059 726 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 NFE2Q16621 373 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 CA9Q16790 459 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 CTXN3Q4LDR2 81 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 BEND6Q5SZJ8 279 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 PM20D1Q6GTS8 502 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 CCNI2Q6ZMN8 369 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 CCDC149Q6ZUS6 474 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 MAATS1Q7Z4T9 603 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 STKLD1Q8NE28 680 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 SCAMP5Q8TAC9 235 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 HNRNPLLQ8WVV9 542 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 C1orf54Q8WWF1 131 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 NKD2Q969F2 451 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 NPY6RQ99463 290 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 SEMA4AQ9H3S1 761 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 LRRC19Q9H756 370 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 PNPLA8Q9NP80 782 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 PCYOX1Q9UHG3 505 aa9.89□□□□□ -0.83
PDLIM5-223ENST00000627587 LRRD1A4D1F6 860 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 PRR23AA6NEV1 266 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 OR6C75A6NL08 312 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 I6L893 689 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 ADAM12O43184 909 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 PRPSAP2O60256 369 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 LILRB3O75022 631 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 TNFRSF8P28908 595 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 CHRNA3P32297 505 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 KCNJ1P48048 391 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 CARSP49589 748 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 GPR15P49685 360 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 SLC25A52Q3SY17 297 aa9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 ZC3H12AQ5D1E8 599 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-223ENST00000627587 TFDP3Q5H9I0 405 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms