RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 TRHDEQ9UKU6 1024 aa11.41□□□□□ -0.58
VPS8-227ENST00000625842 HEMK1Q9Y5R4 338 aaPredicted RBP11.41□□□□□ -0.58
VPS8-227ENST00000625842 C9J4A7 227 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 MFAP3LO75121 409 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 EOMESO95936 686 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 PAEPP09466 180 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 FLOT2Q14254 428 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 APOBEC3HQ6NTF7 200 aaKnown RBP11.4□□□□□ -0.58
VPS8-227ENST00000625842 TTI2Q6NXR4 508 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 TTC7BQ86TV6 843 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 C11orf74Q86VG3 221 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 CYP4X1Q8N118 509 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 NUP93Q8N1F7 819 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 ELOVL6Q9H5J4 265 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 SPTLC3Q9NUV7 552 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 H3BNH8 94 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 TIMM44O43615 452 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 FKBP9O95302 570 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 ACSL3O95573 720 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 SLC35G4P0C7Q5 338 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 MYL2P10916 166 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 PIM1P11309 404 aaPredicted RBP11.4□□□□□ -0.58
VPS8-227ENST00000625842 KRT4P19013 534 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 TLE2Q04725 743 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 STX5Q13190 355 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 DDX39BQ13838 428 aaKnown RBP11.4□□□□□ -0.58
VPS8-227ENST00000625842 CBWD3Q5JTY5 395 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 CBWD5Q5RIA9 395 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 FKBP9P1Q75LS8 142 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 DIS3LQ8TF46 1054 aaKnown RBP11.4□□□□□ -0.58
VPS8-227ENST00000625842 IRF7Q92985 503 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 FAIM2Q9BWQ8 316 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 SLC13A1Q9BZW2 595 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 ZDHHC6Q9H6R6 413 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 PPARGC1AQ9UBK2 798 aaKnown RBP11.4□□□□□ -0.58
VPS8-227ENST00000625842 TMEM114B3SHH9 223 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 ARP10275 920 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 LBX1P52954 281 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 CNTN2Q02246 1040 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 RAET1GQ6H3X3 334 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 TTC29Q8NA56 475 aaPredicted RBP11.4□□□□□ -0.58
VPS8-227ENST00000625842 ADI1Q9BV57 179 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 AGPAT3Q9NRZ7 376 aa11.4□□□□□ -0.58
VPS8-227ENST00000625842 TDRKHQ9Y2W6 561 aaKnown RBP11.4□□□□□ -0.58
VPS8-227ENST00000625842 ATP5HO75947 161 aa11.4□□□□□ -0.59
VPS8-227ENST00000625842 UBA1P22314 1058 aaKnown RBP11.4□□□□□ -0.59
VPS8-227ENST00000625842 BRD2P25440 801 aaKnown RBP11.4□□□□□ -0.59
VPS8-227ENST00000625842 OR1D2P34982 312 aa11.4□□□□□ -0.59
VPS8-227ENST00000625842 TUBP50607 506 aa11.4□□□□□ -0.59
VPS8-227ENST00000625842 DGKEP52429 567 aa11.4□□□□□ -0.59
VPS8-227ENST00000625842 PDX1P52945 283 aa11.4□□□□□ -0.59
VPS8-227ENST00000625842 VSIG10LQ86VR7 867 aa11.4□□□□□ -0.59
VPS8-227ENST00000625842 CPA5Q8WXQ8 436 aa11.4□□□□□ -0.59
VPS8-227ENST00000625842 TASP1Q9H6P5 420 aa11.4□□□□□ -0.59
VPS8-227ENST00000625842 CRTAC1Q9NQ79 661 aa11.4□□□□□ -0.59
VPS8-227ENST00000625842 LMBRD1Q9NUN5 540 aa11.4□□□□□ -0.59
VPS8-227ENST00000625842 ANAPC2Q9UJX6 822 aa11.4□□□□□ -0.59
VPS8-227ENST00000625842 RNF112Q9ULX5 631 aa11.4□□□□□ -0.59
VPS8-227ENST00000625842 H3BUI4 141 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 SYN3O14994 580 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 PABPC1P11940 636 aaKnown RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 CHI3L1P36222 383 aaPredicted RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 FXR1P51114 621 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS8-227ENST00000625842 SOX10P56693 466 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 ZFP28Q8NHY6 868 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 USP7Q93009 1102 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 POLR1EQ9GZS1 481 aaKnown RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 PABPC3Q9H361 631 aaKnown RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 INTS13Q9NVM9 706 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS8-227ENST00000625842 ADGRA2Q96PE1 1338 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 GNG14A0A1W2PPG7 69 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 PEX12O00623 359 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 DIAPH2O60879 1101 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 FTH1P02794 183 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 MMP3P08254 477 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 RBP1P09455 135 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 CXCL8P10145 99 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 MLH1P40692 756 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 CSE1LP55060 971 aaKnown RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 PPP1R15BQ5SWA1 713 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 SETD3Q86TU7 594 aaPredicted RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 IGDCC4Q8TDY8 1250 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 TMEM60Q9H2L4 133 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 LRRC40Q9H9A6 602 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 NEUROD4Q9HD90 331 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 NT5MQ9NPB1 228 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 COL5A2P05997 1499 aaPredicted RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 DIP2BQ9P265 1576 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 SETBP1Q9Y6X0 1596 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 RNF103-CHMP3A0A140T963 221 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 ARVCFO00192 962 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 VIPP01282 170 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 LTFP02788 710 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 DDX6P26196 483 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS8-227ENST00000625842 SHMT1P34896 483 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 ALDH18A1P54886 795 aaKnown RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 KCNK10P57789 538 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 GNGT1P63211 74 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 PRAMEF19Q5SWL8 479 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms