RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 SLC39A2Q9NP94 309 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 ELOVL2Q9NXB9 296 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 PCDHA5Q9Y5H7 936 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 SHROOM3Q8TF72 1996 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 HHLA1C9JL84 531 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 TNFSF14O43557 240 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 DKK1O94907 266 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 C4BPAP04003 597 aaKnown RBP15.42■□□□□ 0.06
PNKP-218ENST00000625299 RALAP11233 206 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 HLA-EP13747 358 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 CORO1AP31146 461 aaKnown RBP15.42■□□□□ 0.06
PNKP-218ENST00000625299 CHKAP35790 457 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 GRK6P43250 576 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 AP3M2P53677 418 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 EFEMP1Q12805 493 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 ENPP2Q13822 863 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 TEAD4Q15561 434 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 E2F4Q16254 413 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 KLHDC10Q6PID8 442 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 DHRS13Q6UX07 377 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 DBX2Q6ZNG2 339 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 CRYBG2Q8N1P7 616 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 ADAM32Q8TC27 787 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 LHX5Q9H2C1 402 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 BLZF1Q9H2G9 400 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 CUEDC2Q9H467 287 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 TFIP11Q9UBB9 837 aaKnown RBP15.42■□□□□ 0.06
PNKP-218ENST00000625299 CLEC4EQ9ULY5 219 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 ANKRD6Q9Y2G4 727 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 ZNF510Q9Y2H8 683 aa15.42■□□□□ 0.06
PNKP-218ENST00000625299 HELZ2Q9BYK8 2649 aaKnown RBP15.41■□□□□ 0.06
PNKP-218ENST00000625299 A0A087WV48 116 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 IGLV3-19P01714 112 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 CYBBP04839 570 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 SYT1P21579 422 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 ACSL1P33121 698 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 CCT8P50990 548 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 DLG4P78352 724 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 CAMK2BQ13554 666 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 KNOP1Q1ED39 458 aaKnown RBP15.41■□□□□ 0.06
PNKP-218ENST00000625299 SGSM1Q2NKQ1 1148 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 UNC13DQ70J99 1090 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 ADAT2Q7Z6V5 191 aaKnown RBP15.41■□□□□ 0.06
PNKP-218ENST00000625299 SCD5Q86SK9 330 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 UNC93AQ86WB7 457 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 DENND1CQ8IV53 801 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 SCUBE3Q8IX30 993 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 C12orf56Q8IXR9 622 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 ZNF366Q8N895 744 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 PDCD7Q8N8D1 485 aaKnown RBP15.41■□□□□ 0.06
PNKP-218ENST00000625299 ENGASEQ8NFI3 743 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 C1orf216Q8TAB5 229 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 PARD3BQ8TEW8 1205 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 DDI1Q8WTU0 396 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 COL26A1Q96A83 441 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 CYFIP2Q96F07 1278 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 PIWIL1Q96J94 861 aaKnown RBP15.41■□□□□ 0.06
PNKP-218ENST00000625299 TWNKQ96RR1 684 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 HNRNPABQ99729 332 aaKnown RBP15.41■□□□□ 0.06
PNKP-218ENST00000625299 TM9SF3Q9HD45 589 aa15.41■□□□□ 0.06
PNKP-218ENST00000625299 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.41■□□□□ 0.06
PNKP-218ENST00000625299 TP53BP1Q12888 1972 aaPredicted RBP15.41■□□□□ 0.06
PNKP-218ENST00000625299 FLNBO75369 2602 aaKnown RBP15.4■□□□□ 0.06
PNKP-218ENST00000625299 PLK4O00444 970 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 STX6O43752 255 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 FSBPO95073 299 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 PIK3CAP42336 1068 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 ASPAP45381 313 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 PSEN1P49768 467 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 COG7P83436 770 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 C19orf57Q0VDD7 668 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 EIF4HQ15056 248 aaKnown RBP15.4■□□□□ 0.06
PNKP-218ENST00000625299 E2F5Q15329 346 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 FNDC3BQ53EP0 1204 aaKnown RBP15.4■□□□□ 0.06
PNKP-218ENST00000625299 IQUBQ8NA54 791 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 OR2T3Q8NH03 318 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 UBL7Q96S82 380 aaPredicted RBP15.4■□□□□ 0.06
PNKP-218ENST00000625299 C7orf25Q9BPX7 421 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 DCLK3Q9C098 648 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 PCED1AQ9H1Q7 454 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 UPF2Q9HAU5 1272 aaKnown RBP15.4■□□□□ 0.06
PNKP-218ENST00000625299 CGNQ9P2M7 1197 aaKnown RBP15.4■□□□□ 0.06
PNKP-218ENST00000625299 FTSJ1Q9UET6 329 aa15.4■□□□□ 0.06
PNKP-218ENST00000625299 AGO1Q9UL18 857 aaKnown RBP15.4■□□□□ 0.06
PNKP-218ENST00000625299 H0Y8X5 98 aa15.39■□□□□ 0.05
PNKP-218ENST00000625299 SEMA4FO95754 770 aa15.39■□□□□ 0.05
PNKP-218ENST00000625299 CD58P19256 250 aa15.39■□□□□ 0.05
PNKP-218ENST00000625299 GRIA4P48058 902 aa15.39■□□□□ 0.05
PNKP-218ENST00000625299 KIF11P52732 1056 aa15.39■□□□□ 0.05
PNKP-218ENST00000625299 CLDN6P56747 220 aa15.39■□□□□ 0.05
PNKP-218ENST00000625299 SMAD1Q15797 465 aaKnown RBP15.39■□□□□ 0.05
PNKP-218ENST00000625299 INAVAQ3KP66 663 aa15.39■□□□□ 0.05
PNKP-218ENST00000625299 TMEM215Q68D42 235 aa15.39■□□□□ 0.05
PNKP-218ENST00000625299 RSRC2Q7L4I2 434 aaKnown RBP15.39■□□□□ 0.05
PNKP-218ENST00000625299 CCDC186Q7Z3E2 898 aa15.39■□□□□ 0.05
PNKP-218ENST00000625299 CYB5D2Q8WUJ1 264 aa15.39■□□□□ 0.05
PNKP-218ENST00000625299 IGSF8Q969P0 613 aa15.39■□□□□ 0.05
PNKP-218ENST00000625299 BIRC7Q96CA5 298 aa15.39■□□□□ 0.05
PNKP-218ENST00000625299 CDK5RAP1Q96SZ6 601 aaKnown RBP15.39■□□□□ 0.05
PNKP-218ENST00000625299 NT5C1AQ9BXI3 368 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms