RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 COPEO14579 308 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 KRT37O76014 449 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 SNRPAP09012 282 aaKnown RBP12.38□□□□□ -0.43
TP53-227ENST00000622645 TROVE2P10155 538 aaKnown RBP eCLIP12.38□□□□□ -0.43
TP53-227ENST00000622645 ZFXP17010 805 aaPredicted RBP12.38□□□□□ -0.43
TP53-227ENST00000622645 MATKP42679 507 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 MAGEA3P43357 314 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 NR2C2P49116 596 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 SULT1E1P49888 294 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 CBLBQ13191 982 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 WLSQ5T9L3 541 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 UNC5BQ8IZJ1 945 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 GPATCH11Q8N954 259 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 SMG8Q8ND04 991 aaKnown RBP12.38□□□□□ -0.43
TP53-227ENST00000622645 UPF1Q92900 1129 aaKnown RBP eCLIP12.38□□□□□ -0.438e-7■■■□□ 18.8
TP53-227ENST00000622645 ZFP42Q96MM3 310 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 QKIQ96PU8 341 aaKnown RBP eCLIP12.38□□□□□ -0.43
TP53-227ENST00000622645 EBNA1BP2Q99848 306 aaKnown RBP12.38□□□□□ -0.43
TP53-227ENST00000622645 USP3Q9Y6I4 520 aa12.38□□□□□ -0.43
TP53-227ENST00000622645 TRDMT1O14717 391 aaKnown RBP12.37□□□□□ -0.43
TP53-227ENST00000622645 KCNE1P15382 129 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 MAP2K2P36507 400 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 ACADSBP45954 432 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 SERPINB4P48594 390 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 CRADDP78560 199 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 PCBP1Q15365 356 aaKnown RBP eCLIP12.37□□□□□ -0.43
TP53-227ENST00000622645 ARCQ7LC44 396 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 STRADAQ7RTN6 431 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 HTR3CQ8WXA8 447 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 SLC7A6OSQ96CW6 309 aaPredicted RBP12.37□□□□□ -0.43
TP53-227ENST00000622645 TNIP3Q96KP6 325 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 MECRQ9BV79 373 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 IQCGQ9H095 443 aaKnown RBP12.37□□□□□ -0.43
TP53-227ENST00000622645 ZFP69BQ9UJL9 534 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 HMX2A2RU54 273 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 IQCA1LA6NCM1 817 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 C2orf71A6NGG8 1288 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 MEIS3P2A8K0S8 358 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 RFPL1O75677 317 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 MYL3P08590 195 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 AXLP30530 894 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 SCNN1AP37088 669 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 ARL4AP40617 200 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 PNPLA4P41247 253 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 PSEN2P49810 448 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 CCL14Q16627 93 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 SLC25A52Q3SY17 297 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 ACCSLQ4AC99 568 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 XKR4Q5GH76 650 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 EFHC1Q5JVL4 640 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 ANKRD20A2Q5SQ80 823 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 MROH9Q5TGP6 573 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 ANKRD20A1Q5TYW2 823 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 ANKRD20A3Q5VUR7 823 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 OTUD1Q5VV17 481 aaPredicted RBP12.37□□□□□ -0.43
TP53-227ENST00000622645 SYPL2Q5VXT5 272 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 PAQR9Q6ZVX9 377 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 GSDMBQ8TAX9 411 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 TFB1MQ8WVM0 346 aaKnown RBP12.37□□□□□ -0.43
TP53-227ENST00000622645 LRRC39Q96DD0 335 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 STAMBPL1Q96FJ0 436 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 LRMDAQ9H2I8 198 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 ARHGEF4Q9NR80 690 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 GTF2IRD1Q9UHL9 959 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 ZNF180Q9UJW8 692 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 FZD10Q9ULW2 581 aa12.37□□□□□ -0.43
TP53-227ENST00000622645 CYB561D2O14569 222 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 XPO1O14980 1071 aaKnown RBP12.36□□□□□ -0.43
TP53-227ENST00000622645 CREB3O43889 395 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 MFSD11O43934 449 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 ZNF865P0CJ78 1059 aaPredicted RBP12.36□□□□□ -0.43
TP53-227ENST00000622645 TPSB2P20231 275 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 MRPS5P82675 430 aaKnown RBP12.36□□□□□ -0.43
TP53-227ENST00000622645 NME3Q13232 169 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 SEMA5AQ13591 1074 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 PRKD1Q15139 912 aaPredicted RBP12.36□□□□□ -0.43
TP53-227ENST00000622645 TPSAB1Q15661 275 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 SV2CQ496J9 727 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 SPRYD7Q5W111 196 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 WSCD1Q658N2 575 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 TWF2Q6IBS0 349 aaKnown RBP12.36□□□□□ -0.43
TP53-227ENST00000622645 LIMS2Q7Z4I7 341 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 CLNKQ7Z7G1 428 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 CHSY1Q86X52 802 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 TP53INP2Q8IXH6 220 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
TP53-227ENST00000622645 OLFM3Q96PB7 478 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 DUSP16Q9BY84 665 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 TRIM55Q9BYV6 548 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 KCNK13Q9HB14 408 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 CEP350Q5VT06 3117 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 PTGESO14684 152 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 XPOTO43592 962 aaKnown RBP12.36□□□□□ -0.43
TP53-227ENST00000622645 DGKIO75912 1065 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 ATP5HO75947 161 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 TOP3BO95985 862 aaKnown RBP12.36□□□□□ -0.43
TP53-227ENST00000622645 EZRP15311 586 aaKnown RBP12.36□□□□□ -0.43
TP53-227ENST00000622645 AP1B1Q10567 949 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 SMAD1Q15797 465 aaKnown RBP12.36□□□□□ -0.43
TP53-227ENST00000622645 KIAA0319Q5VV43 1072 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms