RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 PIM1P11309 404 aaPredicted RBP18.17■□□□□ 0.5
TRA2A-212ENST00000621813 FUT4P22083 530 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 OTUD4Q01804 1114 aaKnown RBP18.17■□□□□ 0.5
TRA2A-212ENST00000621813 KCNT1Q5JUK3 1230 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 B3GNT6Q6ZMB0 384 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 DPH6Q7L8W6 267 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 ZDHHC17Q8IUH5 632 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 PEX5LQ8IYB4 626 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 PIP4K2CQ8TBX8 421 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 ACTL9Q8TC94 416 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 SREK1Q8WXA9 508 aaKnown RBP18.17■□□□□ 0.5
TRA2A-212ENST00000621813 ARHGEF2Q92974 986 aaKnown RBP18.17■□□□□ 0.5
TRA2A-212ENST00000621813 TMEM121Q9BTD3 319 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 ZNF180Q9UJW8 692 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 UBQLN1Q9UMX0 589 aaKnown RBP18.17■□□□□ 0.5
TRA2A-212ENST00000621813 GINS2Q9Y248 185 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 SNX9Q9Y5X1 595 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 SRCAPQ6ZRS2 3230 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 E5RJQ4 531 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 XPOTO43592 962 aaKnown RBP18.17■□□□□ 0.5
TRA2A-212ENST00000621813 CAPN15O75808 1086 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 CD4P01730 458 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 GM2AP17900 193 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 CPT1AP50416 773 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 ITGA7Q13683 1181 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 MFSD10Q14728 455 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 GOLGA7BQ2TAP0 167 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.17■□□□□ 0.5
TRA2A-212ENST00000621813 RNASEH2BQ5TBB1 312 aaKnown RBP18.17■□□□□ 0.5
TRA2A-212ENST00000621813 OR6B2Q6IFH4 312 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 ALKAL1Q6UXT8 129 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 TLK2Q86UE8 772 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 GLIS1Q8NBF1 620 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 DGCR14Q96DF8 476 aaKnown RBP18.17■□□□□ 0.5
TRA2A-212ENST00000621813 OSMRQ99650 979 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 PPCSQ9HAB8 311 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 DNAJC17Q9NVM6 304 aaKnown RBP18.17■□□□□ 0.5
TRA2A-212ENST00000621813 QPCTLQ9NXS2 382 aa18.17■□□□□ 0.5
TRA2A-212ENST00000621813 DPYSL4O14531 572 aa18.16■□□□□ 0.5
TRA2A-212ENST00000621813 PDGFRAP16234 1089 aa18.16■□□□□ 0.5
TRA2A-212ENST00000621813 CYP3A5P20815 502 aa18.16■□□□□ 0.5
TRA2A-212ENST00000621813 PKDCCQ504Y2 493 aa18.16■□□□□ 0.5
TRA2A-212ENST00000621813 FAM183BPQ6ZVS7 135 aa18.16■□□□□ 0.5
TRA2A-212ENST00000621813 CENPUQ71F23 418 aa18.16■□□□□ 0.5
TRA2A-212ENST00000621813 VSIG1Q86XK7 387 aa18.16■□□□□ 0.5
TRA2A-212ENST00000621813 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRA2A-212ENST00000621813 SCHIP1Q9P0W5 487 aaPredicted RBP18.16■□□□□ 0.5
TRA2A-212ENST00000621813 PCSK1NQ9UHG2 260 aa18.16■□□□□ 0.5
TRA2A-212ENST00000621813 ACTL7BQ9Y614 415 aa18.16■□□□□ 0.5
TRA2A-212ENST00000621813 MATN2O00339 956 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 ENDOD1O94919 500 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 PFKMP08237 780 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 SPATA31D3P0C874 917 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 ZSCAN5DPP0CG00 497 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 CCT8P50990 548 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 DYNLT1P63172 113 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 TFDP2Q14188 446 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 FAM47CQ5HY64 1035 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 SPATA31D4Q6ZUB0 917 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 PRUNE1Q86TP1 453 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 RFX6Q8HWS3 928 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 FNDC8Q8TC99 324 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 RXFP2Q8WXD0 754 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 RSAD2Q8WXG1 361 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 C9orf72Q96LT7 481 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 ZNF560Q96MR9 790 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 PWWP2AQ96N64 755 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 KATNAL1Q9BW62 490 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 MAK16Q9BXY0 300 aaKnown RBP18.15■□□□□ 0.5
TRA2A-212ENST00000621813 SLC4A5Q9BY07 1137 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 SAYSD1Q9NPB0 183 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 FGFR1OP2Q9NVK5 253 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 Q9Y3F1 56 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 TTLL3Q9Y4R7 772 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 TCP11X1B4DZS4 312 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 HAS3O00219 553 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 MCF2LO15068 1137 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 PRPSAP2O60256 369 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 IFNB1P01574 187 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 PNPLA4P41247 253 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 ADAM17P78536 824 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 NR1H3Q13133 447 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 PPP1R26Q5T8A7 1209 aaPredicted RBP18.15■□□□□ 0.5
TRA2A-212ENST00000621813 C9orf57Q5W0N0 161 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 ARHGAP17Q68EM7 881 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 PPIL6Q8IXY8 311 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 NUP93Q8N1F7 819 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 HSPH1Q92598 858 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 USP6NLQ92738 828 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 MRPL45Q9BRJ2 306 aaKnown RBP18.15■□□□□ 0.5
TRA2A-212ENST00000621813 ARHGEF38Q9NXL2 777 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 STX18Q9P2W9 335 aaKnown RBP18.15■□□□□ 0.5
TRA2A-212ENST00000621813 ANGPTL2Q9UKU9 493 aa18.15■□□□□ 0.5
TRA2A-212ENST00000621813 H0Y3Z8 333 aa18.14■□□□□ 0.49
TRA2A-212ENST00000621813 EIF3FO00303 357 aaPredicted RBP18.14■□□□□ 0.49
TRA2A-212ENST00000621813 DCTN3O75935 186 aa18.14■□□□□ 0.49
TRA2A-212ENST00000621813 RECQL4O94761 1208 aa18.14■□□□□ 0.49
TRA2A-212ENST00000621813 ITGBL1O95965 494 aaPredicted RBP18.14■□□□□ 0.49
TRA2A-212ENST00000621813 ZNF865P0CJ78 1059 aaPredicted RBP18.14■□□□□ 0.49
TRA2A-212ENST00000621813 ETS1P14921 441 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms