RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 DMDP11532 3685 aa14.91□□□□□ -0.02
CBWD3-217ENST00000621474 AKR1B15C9JRZ8 316 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-217ENST00000621474 ATMINO43313 823 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-217ENST00000621474 GPR37L1O60883 481 aa14.91□□□□□ -0.02
CBWD3-217ENST00000621474 GJA4P35212 333 aa14.91□□□□□ -0.02
CBWD3-217ENST00000621474 PRKCQQ04759 706 aa14.91□□□□□ -0.02
CBWD3-217ENST00000621474 MAPK8IP2Q13387 824 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-217ENST00000621474 DHCR24Q15392 516 aa14.91□□□□□ -0.02
CBWD3-217ENST00000621474 BMP8AQ7Z5Y6 402 aa14.91□□□□□ -0.02
CBWD3-217ENST00000621474 CNGA4Q8IV77 575 aa14.91□□□□□ -0.02
CBWD3-217ENST00000621474 CSGALNACT1Q8TDX6 532 aa14.91□□□□□ -0.02
CBWD3-217ENST00000621474 VCPIP1Q96JH7 1222 aa14.91□□□□□ -0.02
CBWD3-217ENST00000621474 CFAP57Q96MR6 1250 aa14.91□□□□□ -0.02
CBWD3-217ENST00000621474 WDR35Q9P2L0 1181 aa14.91□□□□□ -0.02
CBWD3-217ENST00000621474 ATG2BQ96BY7 2078 aa14.91□□□□□ -0.02
CBWD3-217ENST00000621474 C2CD4BA6NLJ0 364 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 SPECC1L-ADORA2AF8WAN1 911 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 I6L893 689 aaPredicted RBP14.9□□□□□ -0.02
CBWD3-217ENST00000621474 GFRA2O00451 464 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 SLC9A3R1O14745 358 aaPredicted RBP14.9□□□□□ -0.02
CBWD3-217ENST00000621474 RTN2O75298 545 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 ADCY5O95622 1261 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 NFATC1O95644 943 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 FTLP02792 175 aaPredicted RBP14.9□□□□□ -0.02
CBWD3-217ENST00000621474 EIF4A3P38919 411 aaKnown RBP14.9□□□□□ -0.02
CBWD3-217ENST00000621474 VCPP55072 806 aaKnown RBP14.9□□□□□ -0.02
CBWD3-217ENST00000621474 TBX4P57082 545 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 RAB6CQ53S08 254 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 LY6G5CQ5SRR4 150 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 C12orf40Q86WS4 652 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 TMEM25Q86YD3 366 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 PGAP3Q96FM1 320 aaPredicted RBP14.9□□□□□ -0.02
CBWD3-217ENST00000621474 FOXQ1Q9C009 403 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 RAB6CQ9H0N0 254 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 TBC1D17Q9HA65 648 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 ANLNQ9NQW6 1124 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 SPHK2Q9NRA0 654 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 PIGVQ9NUD9 493 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.9□□□□□ -0.02
CBWD3-217ENST00000621474 XPO7Q9UIA9 1087 aaKnown RBP14.9□□□□□ -0.02
CBWD3-217ENST00000621474 LSM7Q9UK45 103 aaKnown RBP14.9□□□□□ -0.02
CBWD3-217ENST00000621474 MTF2Q9Y483 593 aaPredicted RBP14.9□□□□□ -0.02
CBWD3-217ENST00000621474 MYO15AQ9UKN7 3530 aa14.9□□□□□ -0.02
CBWD3-217ENST00000621474 SSU72P8A0A1W2PR75 194 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 SIGLEC16A6NMB1 481 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 TPM1P09493 284 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 GLULP15104 373 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 CDC25BP30305 580 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 RFC1P35251 1148 aaPredicted RBP14.89□□□□□ -0.03
CBWD3-217ENST00000621474 ATXN1P54253 815 aaKnown RBP14.89□□□□□ -0.03
CBWD3-217ENST00000621474 RPL7AP62424 266 aaKnown RBP14.89□□□□□ -0.03
CBWD3-217ENST00000621474 GFPT1Q06210 699 aaPredicted RBP14.89□□□□□ -0.03
CBWD3-217ENST00000621474 MESP2Q0VG99 397 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 FZD5Q13467 585 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 SLC25A52Q3SY17 297 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 FAM133BQ5BKY9 247 aaKnown RBP14.89□□□□□ -0.03
CBWD3-217ENST00000621474 NUGGCQ68CJ6 796 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 NADSYN1Q6IA69 706 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 PLEKHA7Q6IQ23 1121 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 RALGPS2Q86X27 583 aaPredicted RBP14.89□□□□□ -0.03
CBWD3-217ENST00000621474 CPA6Q8N4T0 437 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 TBCBQ99426 244 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.89□□□□□ -0.03
CBWD3-217ENST00000621474 DCLK3Q9C098 648 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 C8orf33Q9H7E9 229 aaPredicted RBP14.89□□□□□ -0.03
CBWD3-217ENST00000621474 FBRSL1Q9HCM7 1045 aaKnown RBP14.89□□□□□ -0.03
CBWD3-217ENST00000621474 DDIT4Q9NX09 232 aa14.89□□□□□ -0.03
CBWD3-217ENST00000621474 SYNJ2BP-COX16A0A087WUM0 186 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 KANSL1LA0AUZ9 987 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 KCNU1A8MYU2 1149 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 M0QYT0 321 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 KRT3P12035 628 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 TARSP26639 723 aaKnown RBP14.88□□□□□ -0.03
CBWD3-217ENST00000621474 SLC6A4P31645 630 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 OPRD1P41143 372 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 HARS2P49590 506 aaKnown RBP14.88□□□□□ -0.03
CBWD3-217ENST00000621474 KPNA1P52294 538 aaPredicted RBP14.88□□□□□ -0.03
CBWD3-217ENST00000621474 CDK17Q00537 523 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 MAMLD1Q13495 774 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 SLC18A3Q16572 532 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 CCDC14Q49A88 953 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 ZC3H12AQ5D1E8 599 aaKnown RBP14.88□□□□□ -0.03
CBWD3-217ENST00000621474 SH3PXD2AQ5TCZ1 1133 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 PPP1R2P3Q6NXS1 205 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 ALKBH5Q6P6C2 394 aaKnown RBP14.88□□□□□ -0.03
CBWD3-217ENST00000621474 RXFP2Q8WXD0 754 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 MCEEQ96PE7 176 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 FAM204AQ9H8W3 233 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 COX16Q9P0S2 106 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 STAP1Q9ULZ2 295 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 ZNF510Q9Y2H8 683 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 PRR33A8MZF0 331 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 HOXC11O43248 304 aaPredicted RBP14.88□□□□□ -0.03
CBWD3-217ENST00000621474 PI15O43692 258 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 ENDOD1O94919 500 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 LATS1O95835 1130 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 SULT1E1P49888 294 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 OGDHQ02218 1023 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 NME3Q13232 169 aa14.88□□□□□ -0.03
CBWD3-217ENST00000621474 C15orf59Q2T9L4 293 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms