RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 MAPK8IP2Q13387 824 aaPredicted RBP19.34■□□□□ 0.69
CIRBP-245ENST00000621399 CCDC122Q5T0U0 273 aa19.34■□□□□ 0.69
CIRBP-245ENST00000621399 NUGGCQ68CJ6 796 aa19.34■□□□□ 0.69
CIRBP-245ENST00000621399 ALKBH5Q6P6C2 394 aaKnown RBP19.34■□□□□ 0.69
CIRBP-245ENST00000621399 TPRG1Q6ZUI0 275 aa19.34■□□□□ 0.69
CIRBP-245ENST00000621399 JOSD2Q8TAC2 188 aa19.34■□□□□ 0.69
CIRBP-245ENST00000621399 RNF34Q969K3 372 aa19.34■□□□□ 0.69
CIRBP-245ENST00000621399 TRIM11Q96F44 468 aa19.34■□□□□ 0.69
CIRBP-245ENST00000621399 NPY6RQ99463 290 aa19.34■□□□□ 0.69
CIRBP-245ENST00000621399 DDX23Q9BUQ8 820 aaKnown RBP19.34■□□□□ 0.69
CIRBP-245ENST00000621399 MFSD1Q9H3U5 465 aa19.34■□□□□ 0.69
CIRBP-245ENST00000621399 C8orf33Q9H7E9 229 aaPredicted RBP19.34■□□□□ 0.69
CIRBP-245ENST00000621399 NHEJ1Q9H9Q4 299 aaPredicted RBP19.34■□□□□ 0.69
CIRBP-245ENST00000621399 ANKRD62A6NC57 917 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 SIGLEC16A6NMB1 481 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 STK25O00506 426 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 MLLT6P55198 1093 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-245ENST00000621399 GFPT1Q06210 699 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-245ENST00000621399 DHCR24Q15392 516 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 SLC18A3Q16572 532 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 SLC25A52Q3SY17 297 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 ZC3H12AQ5D1E8 599 aaKnown RBP19.33■□□□□ 0.68
CIRBP-245ENST00000621399 TRNP1Q6NT89 227 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 RHBDF2Q6PJF5 856 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-245ENST00000621399 SPC24Q8NBT2 197 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 RXFP2Q8WXD0 754 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 ZNF653Q96CK0 615 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 SLC39A13Q96H72 371 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 FCRL2Q96LA5 508 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-245ENST00000621399 GRPEL1Q9HAV7 217 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 PARVAQ9NVD7 372 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 IMPACTQ9P2X3 320 aa19.33■□□□□ 0.68
CIRBP-245ENST00000621399 CNOT8Q9UFF9 292 aaKnown RBP19.33■□□□□ 0.68
CIRBP-245ENST00000621399 HELZP42694 1942 aaKnown RBP19.33■□□□□ 0.68
CIRBP-245ENST00000621399 TCRBV5S1A1TA0A578 114 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 SPECC1L-ADORA2AF8WAN1 911 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 MAN2B1O00754 1011 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 ATMINO43313 823 aaPredicted RBP19.32■□□□□ 0.68
CIRBP-245ENST00000621399 ADH1CP00326 375 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 APOEP02649 317 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 CYP17A1P05093 508 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 MYBL1P10243 752 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 PDGFRAP16234 1089 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 ABCB4P21439 1286 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 SDC4P31431 198 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 RFC1P35251 1148 aaPredicted RBP19.32■□□□□ 0.68
CIRBP-245ENST00000621399 CHKAP35790 457 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 SLC11A2P49281 568 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 AMPD2Q01433 879 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 DEUP1Q05D60 604 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 MAMLD1Q13495 774 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 ASTE1Q2TB18 679 aaPredicted RBP19.32■□□□□ 0.68
CIRBP-245ENST00000621399 LY6G5CQ5SRR4 150 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 DCUN1D2Q6PH85 259 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 ZNF852Q6ZMS4 543 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 SND1Q7KZF4 910 aaKnown RBP eCLIP19.32■□□□□ 0.68
CIRBP-245ENST00000621399 RALGPS2Q86X27 583 aaPredicted RBP19.32■□□□□ 0.68
CIRBP-245ENST00000621399 TMEM25Q86YD3 366 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 NT5C3BQ969T7 300 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 CFAP57Q96MR6 1250 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 PANX2Q96RD6 677 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 TBCBQ99426 244 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 SPHK2Q9NRA0 654 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.32■□□□□ 0.68
CIRBP-245ENST00000621399 MYO1AQ9UBC5 1043 aa19.32■□□□□ 0.68
CIRBP-245ENST00000621399 C2CD4BA6NLJ0 364 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 LATS1O95835 1130 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 MOCS2O96007 188 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-245ENST00000621399 F9P00740 461 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 SLC2A3P11169 496 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 ADH5P11766 374 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 TFE3P19532 575 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-245ENST00000621399 CD72P21854 359 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 CCR1P32246 355 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 GJA4P35212 333 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 STARD6P59095 220 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 EIF4EBP2Q13542 120 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-245ENST00000621399 ANO4Q32M45 955 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 PPP1R15BQ5SWA1 713 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 OTUD1Q5VV17 481 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-245ENST00000621399 PLEKHA7Q6IQ23 1121 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 FLCNQ8NFG4 579 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 PBXIP1Q96AQ6 731 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 MSANTD3Q96H12 275 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 MCEEQ96PE7 176 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 CALCOCO1Q9P1Z2 691 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 RAPGEFL1Q9UHV5 662 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 SLC12A6Q9UHW9 1150 aa19.31■□□□□ 0.68
CIRBP-245ENST00000621399 FAM86C2PA6NEL3 165 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 GOLGA6L6A8MZA4 724 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 ACSL4O60488 711 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 PDGFBP01127 241 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-245ENST00000621399 GPD1P21695 349 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 CTHP32929 405 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 VCPP55072 806 aaKnown RBP19.3■□□□□ 0.68
CIRBP-245ENST00000621399 RPL7AP62424 266 aaKnown RBP19.3■□□□□ 0.68
CIRBP-245ENST00000621399 ATP11AP98196 1134 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 GAD2Q05329 585 aa19.3■□□□□ 0.68
CIRBP-245ENST00000621399 CCDC14Q49A88 953 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms