RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 CBWD3Q5JTY5 395 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 CBWD5Q5RIA9 395 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 ATAT1Q5SQI0 421 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 C4orf33Q8N1A6 199 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 CELF6Q96J87 481 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 WDR18Q9BV38 432 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 CDY1Q9Y6F8 540 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 CCT8L1PA6NM43 557 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 TIMM44O43615 452 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 OR56A5P0C7T3 313 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 ZNF7P17097 686 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 CTCFP49711 727 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 SLC16A1P53985 500 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 ANO5Q75V66 913 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 ANKRD23Q86SG2 305 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 JAMLQ86YT9 394 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 ZNF555Q8NEP9 628 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 FAM136AQ96C01 138 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 CCDC126Q96EE4 140 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 APOL2Q9BQE5 337 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 THAP2Q9H0W7 228 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 UBA2Q9UBT2 640 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 A0A088AWK7 358 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 EIF4E1BA6NMX2 242 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 AGRPO00253 132 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 ENO3P13929 434 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 LAG3P18627 525 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 ZNF10P21506 573 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 PON1P27169 355 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 HTR1BP28222 390 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 CD52P31358 61 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 PRMT2P55345 433 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 BOP1Q14137 746 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 CCDC85BQ15834 202 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 PSMD5Q16401 504 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 C2CD6Q53TS8 623 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 TFDP3Q5H9I0 405 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 PLPP4Q5VZY2 271 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 SLC30A9Q6PML9 568 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 OTOAQ7RTW8 1153 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 ZFPM1Q8IX07 1006 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 AGGF1Q8N302 714 aaeCLIP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 USP38Q8NB14 1042 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 CEP70Q8NHQ1 597 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 ISCUQ9H1K1 167 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 RANBP17Q9H2T7 1088 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 ELOVL6Q9H5J4 265 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 ZDHHC6Q9H6R6 413 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 MARCOQ9UEW3 520 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 RAD51CO43502 376 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 PAX3P23760 479 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ITGA8P53708 1063 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ITGA7Q13683 1181 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 HIC1Q14526 733 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 C16orf72Q14CZ0 275 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 AASDHQ4L235 1098 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ARMC12Q5T9G4 340 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 USP45Q70EL2 814 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 CHPFQ8IZ52 775 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 TEX9Q8N6V9 391 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 EMC1Q8N766 993 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ACTR8Q9H981 624 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 MIEF1Q9NQG6 463 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ABCC13Q9NSE7 274 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ITSN1Q15811 1721 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 NWD1Q149M9 1564 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 TRPC5OSA6NMA1 111 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 PARNO95453 639 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ZBTB48P10074 688 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 MARSP56192 900 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 MKRN4PQ13434 485 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ITGA9Q13797 1035 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 INSCQ1MX18 579 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 OR2W6PQ8NHA6 318 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 SLC5A5Q92911 643 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 RMND5AQ9H871 391 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 DNMT3LQ9UJW3 386 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 PADI4Q9UM07 663 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 CYP7B1O75881 506 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ALDH6A1Q02252 535 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 RARS2Q5T160 578 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 CYB5D1Q6P9G0 228 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 BRSK2Q8IWQ3 736 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ZNF655Q8N720 491 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 CYP2W1Q8TAV3 490 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 MED8Q96G25 268 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ARMC7Q9H6L4 198 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 PPP1R3GB7ZBB8 358 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 STAU1O95793 577 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 KDSRQ06136 332 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 KLC1Q07866 573 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ERMARDQ5T6L9 678 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 FAM46CQ5VWP2 391 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 CLYBLQ8N0X4 340 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 TUBGCP3Q96CW5 907 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 ZNF333Q96JL9 665 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 IARS2Q9NSE4 1012 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 RWDD3Q9Y3V2 267 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms