RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 RFX4Q33E94 735 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 TCEAL5Q5H9L2 206 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 DHFR2Q86XF0 187 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ANKMY2Q8IV38 441 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 LRRC34Q8IZ02 419 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 C8orf59Q8N0T1 100 aaPredicted RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 EIF1ADQ8N9N8 165 aaKnown RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 EAF2Q96CJ1 260 aaPredicted RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 TBATAQ96M53 351 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 RIBC2Q9H4K1 309 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 EHD3Q9NZN3 535 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 MARCOQ9UEW3 520 aaPredicted RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 HAO1Q9UJM8 370 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 DMTF1Q9Y222 760 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 PRLP01236 227 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 NCAM1P13591 858 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 RPS12P25398 132 aaKnown RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 CENPAP49450 140 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 CDK7P50613 346 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 YWHAZP63104 245 aaKnown RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 MYBPC2Q14324 1141 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 PDIA5Q14554 519 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 PTRHD1Q6GMV3 140 aaKnown RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 MARK2Q7KZI7 788 aaKnown RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 NET1Q7Z628 596 aaPredicted RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 S100A13Q99584 98 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 L2HGDHQ9H9P8 463 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 CYLDQ9NQC7 956 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ZC3H4Q9UPT8 1303 aaKnown RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 MAGEB16A2A368 324 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ARHGEF33A8MVX0 844 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 CES2O00748 559 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 HOXB8P17481 243 aaPredicted RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 PEX3P56589 373 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 COPZ1P61923 177 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 PFKFB3Q16875 520 aaPredicted RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 SWT1Q5T5J6 900 aaKnown RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 NT5DC4Q86YG4 428 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ZDHHC13Q8IUH4 622 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 EDC3Q96F86 508 aaKnown RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 MAGEB10Q96LZ2 347 aaPredicted RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 GGT7Q9UJ14 662 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 DFFAO00273 331 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 NR3C2P08235 984 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 CYP2C8P10632 490 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 MUTP22033 750 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 PAX7P23759 505 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 TRAF2Q12933 501 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 STRA8Q7Z7C7 330 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 OR6Y1Q8NGX8 325 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 COX4I2Q96KJ9 171 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ADPRHL2Q9NX46 363 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 AK5Q9Y6K8 562 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 KPNA5O15131 536 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ATP9BO43861 1147 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 RECQL5O94762 991 aaPredicted RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ADSSP30520 456 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 VBP1P61758 197 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 EIF5AP63241 154 aaKnown RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 PRKAA1Q13131 559 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 GNA13Q14344 377 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 DENND5AQ6IQ26 1287 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 KCNV1Q6PIU1 500 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 GLYCTKQ8IVS8 523 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 C18orf25Q96B23 403 aaPredicted RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 VMP1Q96GC9 406 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 TSPAN18Q96SJ8 248 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ENTPD7Q9NQZ7 604 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 AHSPQ9NZD4 102 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 SPASTQ9UBP0 616 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 AAR2Q9Y312 384 aaKnown RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 SMCO3A2RU48 225 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 SEC24AO95486 1093 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 OGNP20774 298 aaKnown RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 GTF2H1P32780 548 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 CAPGP40121 348 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 GCLMP48507 274 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 RALGDSQ12967 914 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF438Q7Z4V0 828 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 SYTL1Q8IYJ3 562 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 TRPV1Q8NER1 839 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF507Q8TCN5 953 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF398Q8TD17 642 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 SLC20A1Q8WUM9 679 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 EEF2KMTQ96G04 330 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 DSN1Q9H410 356 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 CORO2BQ9UQ03 480 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 RAD51CO43502 376 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 TADA2AO75478 443 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 CTSHP09668 335 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 MAPK7Q13164 816 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 GALNT3Q14435 633 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 LLGL1Q15334 1064 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 CHRDL2Q6WN34 429 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 TBC1D16Q8TBP0 767 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 POP1Q99575 1024 aaKnown RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 EHD1Q9H4M9 534 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ALG13Q9NP73 1137 aaKnown RBP7.35□□□□□ -1.23
COLCA1-205ENST00000620864 ARHGAP28Q9P2N2 729 aa7.35□□□□□ -1.23
COLCA1-205ENST00000620864 CCDC154A6NI56 674 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms