RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 C4orf50Q6ZRC1 276 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 SPATA2LQ8IUW3 424 aaPredicted RBP19.73■□□□□ 0.75
PSPC1-206ENST00000619300 DBF4BQ8NFT6 615 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 MDM1Q8TC05 714 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 PYROXD1Q8WU10 500 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 LRRN4Q8WUT4 740 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 UNC93B1Q9H1C4 597 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 ELAC1Q9H777 363 aaKnown RBP19.73■□□□□ 0.75
PSPC1-206ENST00000619300 VPS37BQ9H9H4 285 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 DDIT4Q9NX09 232 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 LGALS13Q9UHV8 139 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 TRAPPC3O43617 180 aa19.72■□□□□ 0.75
PSPC1-206ENST00000619300 BANF1O75531 89 aa19.72■□□□□ 0.75
PSPC1-206ENST00000619300 GCATO75600 419 aa19.72■□□□□ 0.75
PSPC1-206ENST00000619300 OAZ2O95190 189 aa19.72■□□□□ 0.75
PSPC1-206ENST00000619300 SCAPQ12770 1279 aa19.72■□□□□ 0.75
PSPC1-206ENST00000619300 PLEKHG4Q58EX7 1191 aa19.72■□□□□ 0.75
PSPC1-206ENST00000619300 ANKMY2Q8IV38 441 aa19.72■□□□□ 0.75
PSPC1-206ENST00000619300 EDEM1Q92611 657 aa19.72■□□□□ 0.75
PSPC1-206ENST00000619300 ARHGEF2Q92974 986 aaKnown RBP19.72■□□□□ 0.75
PSPC1-206ENST00000619300 QKIQ96PU8 341 aaKnown RBP eCLIP19.72■□□□□ 0.758e-13■■■■□ 24.5
PSPC1-206ENST00000619300 CTNNAL1Q9UBT7 734 aa19.72■□□□□ 0.75
PSPC1-206ENST00000619300 DNAJB4Q9UDY4 337 aa19.72■□□□□ 0.75
PSPC1-206ENST00000619300 MFHAS1Q9Y4C4 1052 aa19.72■□□□□ 0.75
PSPC1-206ENST00000619300 BRCA2P51587 3418 aa19.72■□□□□ 0.75
PSPC1-206ENST00000619300 HACD1B0YJ81 288 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 CREB3O43889 395 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 DGKIO75912 1065 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 HNRNPH2P55795 449 aaKnown RBP19.71■□□□□ 0.75
PSPC1-206ENST00000619300 HTRA3P83110 453 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 CCDC38Q502W7 563 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 PPP1R21Q6ZMI0 780 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 CENPTQ96BT3 561 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 OLFM3Q96PB7 478 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 SELENOSQ9BQE4 189 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 COLEC11Q9BWP8 271 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.71■□□□□ 0.75
PSPC1-206ENST00000619300 PRG3Q9Y2Y8 225 aaPredicted RBP19.71■□□□□ 0.75
PSPC1-206ENST00000619300 PCDHB7Q9Y5E2 793 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 TSC2P49815 1807 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 FRMPD3Q5JV73 1810 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 EXOC1LA0A1B0GW35 172 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 TADA2AO75478 443 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 ARL13BQ3SXY8 428 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 RFX8Q6ZV50 586 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 SCAMP5Q8TAC9 235 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 CCDC110Q8TBZ0 833 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 TFB1MQ8WVM0 346 aaKnown RBP19.71■□□□□ 0.75
PSPC1-206ENST00000619300 KLC2Q9H0B6 622 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 RABEP2Q9H5N1 569 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 ANLNQ9NQW6 1124 aa19.71■□□□□ 0.75
PSPC1-206ENST00000619300 C5orf60A6NFR6 353 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 EEF2KO00418 725 aaKnown RBP19.7■□□□□ 0.74
PSPC1-206ENST00000619300 GRIK1P39086 918 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 GPX6P59796 221 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 CBLBQ13191 982 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 DPYSQ14117 519 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 BBS9Q3SYG4 887 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 FAM182AQ5T1J6 154 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 BEND5Q7L4P6 421 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 ABI1Q8IZP0 508 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 CYP4X1Q8N118 509 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 RIBC1Q8N443 379 aaPredicted RBP19.7■□□□□ 0.74
PSPC1-206ENST00000619300 CCDC33Q8N5R6 958 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 TRIM62Q9BVG3 475 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 ZCWPW1Q9H0M4 648 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 EURLQ9NYK6 297 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 CLUHO75153 1309 aa19.7■□□□□ 0.74
PSPC1-206ENST00000619300 SF3B1O75533 1304 aaKnown RBP eCLIP19.7■□□□□ 0.742e-6■■■■■ 155.1
PSPC1-206ENST00000619300 PITPNM1O00562 1244 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 OR4Q2P0C623 313 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 CHN1P15882 459 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 MAGEA6P43360 314 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 HCAR3P49019 387 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 CXCR3P49682 368 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 SLC39A12Q504Y0 691 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 HEATR6Q6AI08 1181 aaKnown RBP19.69■□□□□ 0.74
PSPC1-206ENST00000619300 FOXR1Q6PIV2 292 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 TDRPQ86YL5 185 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 DCP1BQ8IZD4 617 aaKnown RBP19.69■□□□□ 0.74
PSPC1-206ENST00000619300 ATP11CQ8NB49 1132 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 FBXO36Q8NEA4 188 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 SEPT8Q92599 483 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 FRMD8Q9BZ67 464 aaPredicted RBP19.69■□□□□ 0.74
PSPC1-206ENST00000619300 WDCPQ9H6R7 721 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 ETNK1Q9HBU6 452 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 PPANQ9NQ55 473 aaKnown RBP19.69■□□□□ 0.74
PSPC1-206ENST00000619300 FAM72CH0Y354 149 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 I6L893 689 aaPredicted RBP19.69■□□□□ 0.74
PSPC1-206ENST00000619300 MFSD11O43934 449 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 PHBP35232 272 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 SEC24CP53992 1094 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 SEMA3BQ13214 749 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 PAFAH1B3Q15102 231 aaKnown RBP19.69■□□□□ 0.74
PSPC1-206ENST00000619300 FAM72AQ5TYM5 149 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 FAM72DQ6L9T8 149 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 CAPN12Q6ZSI9 719 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 FAM43BQ6ZT52 329 aaPredicted RBP19.69■□□□□ 0.74
PSPC1-206ENST00000619300 C3orf62Q6ZUJ4 267 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 FAM72BQ86X60 149 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms