RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 GRIK1P39086 918 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 PLA2G4AP47712 749 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 SPAG1Q07617 926 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 DSG2Q14126 1118 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 UBAP2LQ14157 1087 aaKnown RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 IL17AQ16552 155 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 LINC00303Q3SY05 128 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 MPP7Q5T2T1 576 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 MFSD2AQ8NA29 543 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 TPCN2Q8NHX9 752 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 TMC2Q8TDI7 906 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 PLD4Q96BZ4 506 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 REEP2Q9BRK0 252 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 FAM117AQ9C073 453 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 SEMA4CQ9C0C4 833 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 DMAP1Q9NPF5 467 aaPredicted RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 TLR8Q9NR97 1041 aaKnown RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 GPR27Q9NS67 375 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 CLIC5Q9NZA1 410 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 SUN2Q9UH99 717 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 GTF3C4Q9UKN8 822 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 AK5Q9Y6K8 562 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 DMXL2Q8TDJ6 3036 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 ANTXRLA6NF34 631 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 SYNCRIPO60506 623 aaKnown RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 TCEA3O75764 348 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 ASLP04424 464 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 ITGB3P05106 788 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 MCCD1P59942 119 aaPredicted RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 ZNF234Q14588 700 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 TTC31Q49AM3 519 aaPredicted RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 SDHAF4Q5VUM1 108 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 ZNF776Q68DI1 518 aaPredicted RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 TRIM69Q86WT6 500 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 TICAM1Q8IUC6 712 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 TMEM130Q8N3G9 435 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 OR2T34Q8NGX1 318 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 FBXO32Q969P5 355 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 SMARCD1Q96GM5 515 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 PRR11Q96HE9 360 aaPredicted RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 ANKRD36BP1Q96IX9 119 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 ACOX2Q99424 681 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 LGMNQ99538 433 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 MKRN2Q9H000 416 aaKnown RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 CD93Q9NPY3 652 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 GDF3Q9NR23 364 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 SEPT3Q9UH03 358 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 EIF2B4Q9UI10 523 aaKnown RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 AGAP1Q9UPQ3 857 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 TARSL2A2RTX5 802 aaKnown RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 ANKRD63C9JTQ0 380 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 ITGAVP06756 1048 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 PTPN1P18031 435 aaKnown RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 ITGB6P18564 788 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 PRKCHP24723 683 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 CD82P27701 267 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 CHKAP35790 457 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 ARRB1P49407 418 aaPredicted RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 AP3M2P53677 418 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 HMGN5P82970 282 aaKnown RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 FOXK1P85037 733 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 BMT2Q1RMZ1 405 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 NAPEPLDQ6IQ20 393 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 DTHD1Q6ZMT9 781 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 CCDC186Q7Z3E2 898 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 TMPRSS6Q8IU80 811 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 SCN4BQ8IWT1 228 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 SCML4Q8N228 414 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 DEFB119Q8N690 84 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 OR4C6Q8NH72 309 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 BIRC7Q96CA5 298 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 LMLNQ96KR4 655 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 ACCSQ96QU6 501 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 BBS2Q9BXC9 721 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 B3GNT5Q9BYG0 378 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 BTBD1Q9H0C5 482 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 C6orf106Q9H6K1 298 aaPredicted RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 INTS13Q9NVM9 706 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 NLGN3Q9NZ94 848 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 CGNQ9P2M7 1197 aaKnown RBP4.83□□□□□ -1.64
SNCA-213ENST00000618500 CSNK1G3Q9Y6M4 447 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 MYO18BQ8IUG5 2567 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 LRP4O75096 1905 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 A0A087WWV3 80 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 FAM149AA5PLN7 773 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 TMX2-CTNND1H3BSU7 103 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 FAM13AO94988 1023 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 BMP15O95972 392 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 BDNFP23560 247 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 CCDC173Q0VFZ6 552 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 MORC3Q14149 939 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 SGO2Q562F6 1265 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 CNNM4Q6P4Q7 775 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 ZNF720Q7Z2F6 126 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 FAM35AQ86V20 835 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 DCP2Q8IU60 420 aaKnown RBP4.82□□□□□ -1.64
SNCA-213ENST00000618500 AHI1Q8N157 1196 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 ARHGAP18Q8N392 663 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 FBXO18Q8NFZ0 1043 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 RAD54LQ92698 747 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms